WormBase Tree Display for Variation: WBVar00065159
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| WBVar00065159 | Name | Public_name | WBVar00065159 | ||
|---|---|---|---|---|---|
| Other_name | pas24629 | ||||
| snp_F09G8[2] | |||||
| haw44699 | |||||
| cewivar00108041 | |||||
| F09G8.3.1:c.768A>T | |||||
| CE24890:p.Arg256= | |||||
| HGVSg | CHROMOSOME_III:g.8267178A>T | ||||
| Sequence_details | SMap | S_parent | Sequence | F09G8 | |
| Flanking_sequences | tcagctattgaacaaaagtttttgatggaattcagagagccaatgaccgcttcaactggatccaaattgttcggtcctgcgattcctgaagtgcatgtttgtgcagtgaccaacagaagatatgcagaagtgacgtgagttgtccttcttttaaaagacagcagagaatttttgccaaaaatctaatgatttgataaccttaaaattagttttgccattaaaaatacttgtaatttttaattaaacaaattttctctaattgtaaactgaataattgaacagtttttttttcagaacacg | tgtaaagatactcgtgctacagttaaggtcacagacgcaggaaaaggaaaattcgatattgatggtctccaattgcacgatttcaggcatcttcaagccaggtatattttgcgaacatcgaatttttctgataacataatttcagagagattcttcttgcaccaatgattgtcagtcagtctctcggtcgatttgatgtaacagcgacaacttcatgtatttctaatactcttccagaagcaccaaacaaggcgccattgtgagactattaaaatttgttactctgcaacagtataatca | |||
| Mapping_target | F09G8 | ||||
| Type_of_mutation | Substitution | A | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (31) | |||||
| Laboratory | AX | ||||
| RW | |||||
| Person | WBPerson6900 | ||||
| WBPerson1562 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| SNP_Wicks | |||||
| WGS_Hawaiian_Waterston | |||||
| History | Acquires_merge | WBVar00067888 | |||
| WBVar01266155 | |||||
| WBVar01331523 | |||||
| WBVar00244107 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00017319 | |||
| Transcript | F09G8.3.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | F09G8.3.1:c.768A>T | ||||
| HGVSp | CE24890:p.Arg256= | ||||
| cDNA_position | 768 | ||||
| CDS_position | 768 | ||||
| Protein_position | 256 | ||||
| Exon_number | 6/10 | ||||
| Codon_change | cgA/cgT | ||||
| Amino_acid_change | R | ||||
| Reference | WBPaper00004703 | ||||
| WBPaper00037807 | |||||
| Method | WGS_Pasadena_Quinlan |
