WormBase Tree Display for Variation: WBVar00064144
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| WBVar00064144 | Evidence | Paper_evidence | WBPaper00004703 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00064144 | |||
| Other_name | snp_F11A1[1] | ||||
| haw107020 | |||||
| pas24426 | |||||
| cewivar00061417 | |||||
| M79.2.1:c.198+16A>C | |||||
| HGVSg | CHROMOSOME_X:g.10628543T>G | ||||
| Sequence_details | SMap | S_parent | Sequence | CHROMOSOME_X | |
| Flanking_sequences | aacataactttaaaactggaaacaagttctcacctaaaaattaatccggcaaagaaaattgccttctctgttgaattccaattcttctcaggcatcatgcctaatagagtaggccgtatcgtaggagctgtttgaaagcatggtccaagatcagtctgtaattagtccaaacaattaaccaatagattataaactcaatgttaacccacatcaattatcctcttcactcgttcttcagcaatttgatctgccgatttttcactctgaaaagtcaaaacatgagtcaccggaagatccaaa | gtcgacttcacttaccctttgttcttcactctcttcattctcatatgtgttttcaagtttttctcgtgggaaatatccttgaatcattgcaaccacgtgaagataccattgtggaagcactccccagctgataacatgtttgattttacacaacgtcaagtgcgtctacgacatacctcagaccaaagaaaataaggacgactgttgagaagtaggtcagtgttatacaactgccataaaagtaaaatattgaaagtaacatatctgaaattaaattatgagatgaaaatgtgatttaga | |||
| Mapping_target | CHROMOSOME_X | ||||
| Type_of_mutation | Substitution | T | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (38) | |||||
| Laboratory | RW | ||||
| Person | WBPerson6900 | ||||
| WBPerson1562 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| SNP_Wicks | |||||
| WGS_Hawaiian_Waterston | |||||
| History | Acquires_merge | WBVar00082660 | |||
| WBVar00244135 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00010902 | |||
| Transcript | M79.2.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | M79.2.1:c.198+16A>C | ||||
| Intron_number | 3/11 | ||||
| Reference | WBPaper00004703 | ||||
| Method | WGS_Pasadena_Quinlan |
