WormBase Tree Display for Variation: WBVar00064127
expand all nodes | collapse all nodes | view schema
| WBVar00064127 | Name | Public_name | WBVar00064127 | ||
|---|---|---|---|---|---|
| Other_name | haw43947 | ||||
| cewivar00151021 | |||||
| R151.1b.1:c.537C>T | |||||
| R151.1c.1:c.48C>T | |||||
| CE50526:p.Tyr244= | |||||
| R151.1a.1:c.732C>T | |||||
| CE50338:p.Tyr16= | |||||
| CE50468:p.Tyr179= | |||||
| HGVSg | CHROMOSOME_III:g.7218860C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | R151 | |
| Flanking_sequences | gatctgaacccgaatcagaggagta | acctttagaatagccaacgccgatt | |||
| Mapping_target | R151 | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | ||
| WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||
| WGS_Hawaiian_Waterston | |||||
| WBStrain00006631 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00008273 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023018 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023138 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00020106 | |||
| Transcript | R151.1c.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | R151.1c.1:c.48C>T | ||||
| HGVSp | CE50338:p.Tyr16= | ||||
| cDNA_position | 48 | ||||
| CDS_position | 48 | ||||
| Protein_position | 16 | ||||
| Exon_number | 1/10 | ||||
| Codon_change | taC/taT | ||||
| Amino_acid_change | Y | ||||
| R151.1a.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | R151.1a.1:c.732C>T | ||||
| HGVSp | CE50526:p.Tyr244= | ||||
| cDNA_position | 732 | ||||
| CDS_position | 732 | ||||
| Protein_position | 244 | ||||
| Exon_number | 5/14 | ||||
| Codon_change | taC/taT | ||||
| Amino_acid_change | Y | ||||
| R151.1b.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | R151.1b.1:c.537C>T | ||||
| HGVSp | CE50468:p.Tyr179= | ||||
| cDNA_position | 537 | ||||
| CDS_position | 537 | ||||
| Protein_position | 179 | ||||
| Exon_number | 4/12 | ||||
| Codon_change | taC/taT | ||||
| Amino_acid_change | Y | ||||
| Remark | [20081124 db] this Variation was previously named hw43947 | ||||
| Method | WGS_Hawaiian_Waterston |
