WormBase Tree Display for Variation: WBVar00062559
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WBVar00062559 | Evidence | Paper_evidence | WBPaper00004703 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00062559 | |||
Other_name | pas24109 | ||||
snp_C14H10[1] | |||||
haw106632 | |||||
cewivar00060962 | |||||
C14H10.3b.1:c.-137+90T>C | |||||
C14H10.3a.1:c.69-653T>C | |||||
HGVSg | CHROMOSOME_X:g.10224993A>G | ||||
Sequence_details | SMap | S_parent | Sequence | C14H10 | |
Flanking_sequences | tgaatttaaacgagccctctcactaacattgtttgttggtgttttttattgatgacacatagtctgaatttgtaaaaatttacctacgaacacgagaaacttcaaaaagcagttagtgaaaaacaaagaaagtagtttgaattagcagatagcagaattgaggggcacgacaattatatgtaaacacacaacagtttttgtagaactctcttggttccagaacttttgtcatgcagaattgagaaagaacatgtgttgctgaagtcaagtttggatagtgttttttcactcagcttatag | aaattactcttcaaaatatttttaatgtactattattgtttttgttaaaaattttcgagagagtatgtttatattctcaaaattattacgttgaagttaatgttggatgatttttaaatctatgcgaagagcacggtaacatgaatgatgagctctccgttctatgtttcattgcctcatgattctttttctgaaaaattttttttttgattacagttacgttataaagatgaaaactgcaaagaagaatataatttgaaatgacgtgttctattttcagaatttgatttaaagaaaaaa | |||
Mapping_target | C14H10 | ||||
Type_of_mutation | Substitution | A | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (30) | |||||
Laboratory | RW | ||||
Person | WBPerson6900 | ||||
WBPerson1562 | |||||
Analysis | WGS_Pasadena_Quinlan | ||||
Million_mutation_project_reanalysis | |||||
SNP_Wicks | |||||
WGS_Hawaiian_Waterston | |||||
History | Acquires_merge | WBVar00082272 | |||
WBVar00243262 | |||||
Status | Live | ||||
Affects | Gene | WBGene00007593 | |||
Transcript | C14H10.3b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | C14H10.3b.1:c.-137+90T>C | ||||
Intron_number | 1/13 | ||||
C14H10.3a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C14H10.3a.1:c.69-653T>C | ||||
Intron_number | 2/13 | ||||
Reference | WBPaper00004703 | ||||
Method | WGS_Pasadena_Quinlan |