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WormBase Tree Display for Variation: WBVar00062559

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Name Class

WBVar00062559EvidencePaper_evidenceWBPaper00004703
NamePublic_nameWBVar00062559
Other_namepas24109
snp_C14H10[1]
haw106632
cewivar00060962
C14H10.3b.1:c.-137+90T>C
C14H10.3a.1:c.69-653T>C
HGVSgCHROMOSOME_X:g.10224993A>G
Sequence_detailsSMapS_parentSequenceC14H10
Flanking_sequencestgaatttaaacgagccctctcactaacattgtttgttggtgttttttattgatgacacatagtctgaatttgtaaaaatttacctacgaacacgagaaacttcaaaaagcagttagtgaaaaacaaagaaagtagtttgaattagcagatagcagaattgaggggcacgacaattatatgtaaacacacaacagtttttgtagaactctcttggttccagaacttttgtcatgcagaattgagaaagaacatgtgttgctgaagtcaagtttggatagtgttttttcactcagcttatagaaattactcttcaaaatatttttaatgtactattattgtttttgttaaaaattttcgagagagtatgtttatattctcaaaattattacgttgaagttaatgttggatgatttttaaatctatgcgaagagcacggtaacatgaatgatgagctctccgttctatgtttcattgcctcatgattctttttctgaaaaattttttttttgattacagttacgttataaagatgaaaactgcaaagaagaatataatttgaaatgacgtgttctattttcagaatttgatttaaagaaaaaa
Mapping_targetC14H10
Type_of_mutationSubstitutionAG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (30)
LaboratoryRW
PersonWBPerson6900
WBPerson1562
AnalysisWGS_Pasadena_Quinlan
Million_mutation_project_reanalysis
SNP_Wicks
WGS_Hawaiian_Waterston
HistoryAcquires_mergeWBVar00082272
WBVar00243262
StatusLive
AffectsGeneWBGene00007593
TranscriptC14H10.3b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC14H10.3b.1:c.-137+90T>C
Intron_number1/13
C14H10.3a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC14H10.3a.1:c.69-653T>C
Intron_number2/13
ReferenceWBPaper00004703
MethodWGS_Pasadena_Quinlan