WormBase Tree Display for Variation: WBVar00062386

WBVar00062386 Name: Public_name: WBVar00062386
    Other_name: pas9083
      snp_C54E10[8]
      haw93575
      haw177481
      cewivar00049295
      C54E10.7.1:c.-17-2626C>G
      C54E10.1:n.998C>G
    HGVSg: CHROMOSOME_V:g.18816422C>G
  Sequence_details: SMap: S_parent: Sequence: C54E10
    Flanking_sequences: catgacgcattctcacagtttttcg ggaaaaatttgcgcttcttgatcgt
    Mapping_target: C54E10
    Type_of_mutation: Substitution: C G
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (34)
    Laboratory: RW
    Person: WBPerson1562
      WBPerson6900
      WBPerson4037
    Analysis: WGS_Hawaiian_Waterston
      WGS_Yanai
      Million_mutation_project_reanalysis
      SNP_Wicks
      WGS_Pasadena_Quinlan
    History: Acquires_merge: WBVar00243853
        WBVar00597346
        WBVar00104224
    Status: Live
  Affects: Gene: WBGene00008306
      WBGene00195058
    Transcript: C54E10.7.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: C54E10.7.1:c.-17-2626C>G
        Intron_number: 5/7
    Pseudogene: C54E10.1 VEP_consequence: non_coding_transcript_exon_variant
        VEP_impact: MODIFIER
        HGVSc: C54E10.1:n.998C>G
        cDNA_position: 998
        Exon_number: 9/18
  Reference: WBPaper00038208
    WBPaper00004703
  Remark: [20081124 db] this Variation was previously named hw93575
  Method: WGS_Hawaiian_Waterston