WormBase Tree Display for Variation: WBVar00062382
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| WBVar00062382 | Name | Public_name | WBVar00062382 | ||
|---|---|---|---|---|---|
| Other_name | haw43598 | ||||
| cewivar00196936 | |||||
| Y40D12A.2.1:c.682C>T | |||||
| CE19621:p.Gln228Ter | |||||
| HGVSg | CHROMOSOME_III:g.6613715C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | Y40D12A | |
| Flanking_sequences | cagtcaaatgcaaaatgtgactcaa | aatgctgcaatggaaccatggactg | |||
| Mapping_target | Y40D12A | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
| WGS_Hawaiian_Waterston | |||||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00021503 | |||
| Transcript | Y40D12A.2.1 | VEP_consequence | stop_gained | ||
| VEP_impact | HIGH | ||||
| HGVSc | Y40D12A.2.1:c.682C>T | ||||
| HGVSp | CE19621:p.Gln228Ter | ||||
| cDNA_position | 707 | ||||
| CDS_position | 682 | ||||
| Protein_position | 228 | ||||
| Exon_number | 7/12 | ||||
| Codon_change | Caa/Taa | ||||
| Amino_acid_change | Q/* | ||||
| Remark | [20081124 db] this Variation was previously named hw43598 | ||||
| Method | WGS_Hawaiian_Waterston |
