WormBase Tree Display for Variation: WBVar00062194
expand all nodes | collapse all nodes | view schema
| WBVar00062194 | Name | Public_name | WBVar00062194 | ||
|---|---|---|---|---|---|
| Other_name | pas24036 | ||||
| haw106551 | |||||
| cewivar00060856 | |||||
| T06H11.1f.1:c.216+46T>A | |||||
| HGVSg | CHROMOSOME_X:g.10132059A>T | ||||
| Sequence_details | SMap | S_parent | Sequence | T06H11 | |
| Flanking_sequences | ccgatttctgaacttcgtcatttcaaaacagttttcgtgctataggcacactaaaagggcatgctgagattttggaaatcggcggttggtctcagttggaataagaaaacaccatgtatgaatatataatcaaattatggaaaacactcagaaatgtgcttctttttcaagagacagagaaggggaaagggagtagaacccataccattaagttggaccctaacaccacctccgcatgactgggtgtccgacacaaacattttttgttgtgattcaagtgtttttttttctgttggtgca | aaaatacagggtttttgctcgatttaatgcaagaaaaagtcttacggatccaaaaaatccgccgccactaccgcctccagtgcttccaccacctgaaagtgggggagccaagcccaattgaacttctgtgtgcacattttgagcgtaatgctgaaccactaatggctgcattattaatgcttgatgttgccctgcagatgattgcaatcttctaggatgcccttctttttgaaggtcctttgtgacctgcaaaattacacatattcagtgtttttgtttgtatttttgagattgagtaat | |||
| Mapping_target | T06H11 | ||||
| Type_of_mutation | Substitution | A | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (38) | |||||
| Laboratory | RW | ||||
| Person | WBPerson6900 | ||||
| WBPerson1562 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| WGS_Hawaiian_Waterston | |||||
| History | Acquires_merge | WBVar00082191 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00006792 | |||
| Transcript | T06H11.1f.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | T06H11.1f.1:c.216+46T>A | ||||
| Intron_number | 2/14 | ||||
| Method | WGS_Pasadena_Quinlan |
