WormBase Tree Display for Variation: WBVar00062164
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| WBVar00062164 | Name | Public_name | WBVar00062164 | ||
|---|---|---|---|---|---|
| Other_name | pas24030 | ||||
| haw106546 | |||||
| cewivar00060849 | |||||
| T06H11.1f.1:c.412+5837C>T | |||||
| T06H11.1b.1:c.262+1927C>T | |||||
| HGVSg | CHROMOSOME_X:g.10123092G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | T06H11 | |
| Flanking_sequences | ttttcatcaggctgctgcgtcgttggttgaaaatcttgtattatttgagtaccgacccaggagaccggttgtgggggcatcaggaagttatgatgggaatggtgagcaggtgagcccgatgaatgtccgtatgtacttcttcgtcgatcatgtcttgtggatccacgacgttcgtccattaggtgagcgctcaccgattgcaacattttcttgcagggagagtttgagaggagagaagaagtctatgatagatatgttttgcaagttttattttcgagcatagttttttgaaacgcagta | tttctcggtgaaaggaacgtcgaaccaaaaccaaacacaacaattatgaagagggaaatgtgaaaaacgtgtattggtgcgagtttgagtgaacgccaagatcggctctgttgtcaagatgctgcaagtgcatgaaaatgcccatccagacaaaacagggcatattccatgggccacatcgtttatgatgtttcttctcaactcgaaacatatacccccatattttgtcggacatattcttccattcttagacgtcgttttctcgttttctcaatgacgatctgacggcagtgtagagca | |||
| Mapping_target | T06H11 | ||||
| Type_of_mutation | Substitution | G | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (20) | |||||
| Laboratory | RW | ||||
| Person | WBPerson6900 | ||||
| WBPerson1562 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| WGS_Hawaiian_Waterston | |||||
| History | Acquires_merge | WBVar00082186 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00006792 | |||
| Transcript | T06H11.1b.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | T06H11.1b.1:c.262+1927C>T | ||||
| Intron_number | 3/12 | ||||
| T06H11.1f.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | T06H11.1f.1:c.412+5837C>T | ||||
| Intron_number | 4/14 | ||||
| Method | WGS_Pasadena_Quinlan |
