WormBase Tree Display for Variation: WBVar00062124
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WBVar00062124 | Name | Public_name | WBVar00062124 | ||
---|---|---|---|---|---|
Other_name | pas24022 | ||||
cewivar00060839 | |||||
T06H11.1c.1:c.148+2825C>T | |||||
T06H11.1f.1:c.413-5182C>T | |||||
T06H11.1b.1:c.263-5182C>T | |||||
T06H11.1d.1:c.293-5182C>T | |||||
HGVSg | CHROMOSOME_X:g.10114513G>A | ||||
Sequence_details | SMap | S_parent | Sequence | T06H11 | |
Flanking_sequences | tcgaggaagatataggtaagtgccgggtttactaaaaaattttgtcgtgtcaatttaattgttgcaacatgatttttgttctcgtaaatctaatgtaaggaggttgtccaaacaatttaaccaacgtagatcgatacaaaaatacagtcattcataagtgttctaaattttagagacaggaacacttgaatggatgtttcaatattatgagtgatgacttgtgtatagcaatggattaaaaattgaattgttgtttttcagtaagtttgaaaccggagaactatgattgtgttgcattat | aaaaccatctacatacacgacgaacaaatccaataaaaatttgaatagttagtgaaatgaaacaaacgttggttaatatacaatttagttgattcataaaattaattttgtttttttttctattaatcaaaagaaattaattccagagaaatctcgagcataatttatttttatcaaaaaaaatgcactggatcgtactgatattgaccatttcgaactacacagactctatgaccacaacagatgcaaacatgtctttacaaaaaggcaacaaaaacatgacgccttatctcgaatcgt | |||
Mapping_target | T06H11 | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (18) | |||||
Person | WBPerson6900 | ||||
Analysis | WGS_Pasadena_Quinlan | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00006792 | |||
Transcript | T06H11.1b.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | T06H11.1b.1:c.263-5182C>T | ||||
Intron_number | 3/12 | ||||
T06H11.1f.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T06H11.1f.1:c.413-5182C>T | ||||
Intron_number | 4/14 | ||||
T06H11.1d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T06H11.1d.1:c.293-5182C>T | ||||
Intron_number | 1/11 | ||||
T06H11.1c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | T06H11.1c.1:c.148+2825C>T | ||||
Intron_number | 2/13 | ||||
Method | WGS_Pasadena_Quinlan |