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WormBase Tree Display for Variation: WBVar00062107

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Name Class

WBVar00062107NamePublic_nameWBVar00062107
Other_namehaw43543
cewivar00196901
T12A2.13.1:c.205-80A>T
T12A2.1.1:c.853-5154T>A
HGVSgCHROMOSOME_III:g.6265507T>A
Sequence_detailsSMapS_parentSequenceC18F10
Flanking_sequencesgcctgccgtgtggctaattttttttaaatctggatctagtgctgatttac
Mapping_targetC18F10
Type_of_mutationSubstitutionTA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisMillion_mutation_project_reanalysis
WGS_Hawaiian_Waterston
WBStrain00022930From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00005164
WBGene00020436
TranscriptT12A2.13.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT12A2.13.1:c.205-80A>T
Intron_number1/3
T12A2.1.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT12A2.1.1:c.853-5154T>A
Intron_number7/10
Remark[20081124 db] this Variation was previously named hw43543
MethodWGS_Hawaiian_Waterston