WormBase Tree Display for Variation: WBVar00061037
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WBVar00061037 | Name | Public_name | WBVar00061037 | ||
---|---|---|---|---|---|
Other_name | haw43329 | ||||
cewivar00196712 | |||||
C05D2.1e.1:c.613+897G>A | |||||
C05D2.11:n.826G>A | |||||
C05D2.1d.1:c.614-727G>A | |||||
C05D2.1a.1:c.614-727G>A | |||||
C05D2.1c.1:c.158-727G>A | |||||
C05D2.1c.3:c.158-727G>A | |||||
C05D2.1c.2:c.158-727G>A | |||||
HGVSg | CHROMOSOME_III:g.5627769G>A | ||||
Sequence_details | SMap | S_parent | Sequence | C05D2 | |
Flanking_sequences | taaccccattagaaaattttgaatg | tctctacggatctcagcaaacgttc | |||
Mapping_target | C05D2 | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00022910 | |||
WBGene00000900 | |||||
Transcript | C05D2.1e.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | C05D2.1e.1:c.613+897G>A | ||||
Intron_number | 6/11 | ||||
C05D2.1d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C05D2.1d.1:c.614-727G>A | ||||
Intron_number | 5/9 | ||||
C05D2.1c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C05D2.1c.1:c.158-727G>A | ||||
Intron_number | 6/12 | ||||
C05D2.1c.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C05D2.1c.2:c.158-727G>A | ||||
Intron_number | 5/11 | ||||
C05D2.11 | VEP_consequence | non_coding_transcript_exon_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C05D2.11:n.826G>A | ||||
cDNA_position | 826 | ||||
Exon_number | 1/1 | ||||
C05D2.1c.3 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C05D2.1c.3:c.158-727G>A | ||||
Intron_number | 3/8 | ||||
C05D2.1a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C05D2.1a.1:c.614-727G>A | ||||
Intron_number | 5/11 | ||||
Remark | [20081124 db] this Variation was previously named hw43329 | ||||
Method | WGS_Hawaiian_Waterston |