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WormBase Tree Display for Variation: WBVar00061037

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Name Class

WBVar00061037NamePublic_nameWBVar00061037
Other_namehaw43329
cewivar00196712
C05D2.1e.1:c.613+897G>A
C05D2.11:n.826G>A
C05D2.1d.1:c.614-727G>A
C05D2.1a.1:c.614-727G>A
C05D2.1c.1:c.158-727G>A
C05D2.1c.3:c.158-727G>A
C05D2.1c.2:c.158-727G>A
HGVSgCHROMOSOME_III:g.5627769G>A
Sequence_detailsSMapS_parentSequenceC05D2
Flanking_sequencestaaccccattagaaaattttgaatgtctctacggatctcagcaaacgttc
Mapping_targetC05D2
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisMillion_mutation_project_reanalysis
WGS_Hawaiian_Waterston
WBStrain00022930From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00022910
WBGene00000900
TranscriptC05D2.1e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC05D2.1e.1:c.613+897G>A
Intron_number6/11
C05D2.1d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC05D2.1d.1:c.614-727G>A
Intron_number5/9
C05D2.1c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC05D2.1c.1:c.158-727G>A
Intron_number6/12
C05D2.1c.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC05D2.1c.2:c.158-727G>A
Intron_number5/11
C05D2.11VEP_consequencenon_coding_transcript_exon_variant
VEP_impactMODIFIER
HGVScC05D2.11:n.826G>A
cDNA_position826
Exon_number1/1
C05D2.1c.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC05D2.1c.3:c.158-727G>A
Intron_number3/8
C05D2.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC05D2.1a.1:c.614-727G>A
Intron_number5/11
Remark[20081124 db] this Variation was previously named hw43329
MethodWGS_Hawaiian_Waterston