WormBase Tree Display for Variation: WBVar00060975

WBVar00060975 Evidence: Paper_evidence: WBPaper00037807
  Name: Public_name: WBVar00060975
    Other_name (21)
    HGVSg: CHROMOSOME_III:g.7630014C>A
  Sequence_details: SMap: S_parent: Sequence: ZK783
    Flanking_sequences: ccctagatcagagggtacaatcagagttagaattacaacattaggagaggatggtgaaccagaaaccgcaacaaagccaggaatcagtgcacctgacaaaactggagaaggttcaaaaactgagagtgacggagaagagaaattgactgttgaaaaagatgggaaagaggcacagtcgtctggatcaagtgctacatcatctggaaaaaaatccgaagcgacatcaggatcttctagctcttctgcaaaatctgggaccggatcggaagcttctggatcttctggagctagttcatcttc ggatcaggagtttcgggagagtctggatcatcggtttcaacagagtctggaagctttggaacctcttctagtggatctgttggatcagaagcaactggatcgacaggagttgacggatctgaatcagggaagccatctaaatcatcaactgaggaaaaattgccatttaccaaaaacggggaaaaatctccaatatctggttcggatacaaccggcaaagaatcctcagaagaaactacttcgagaaaacctatcgaaggatctgattcgcttacagaaggatccggatctggagaatgg
    Mapping_target: ZK783
    Type_of_mutation: Substitution: C A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (25)
    Laboratory: AX
      RW
    Person: WBPerson6900
      WBPerson1562
    Analysis: WGS_Pasadena_Quinlan
      WGS_De_Bono
      Million_mutation_project_reanalysis
      WGS_Hawaiian_Waterston
    History: Acquires_merge: WBVar00065948
        WBVar01265659
        WBVar01330984
    Status: Live
  Affects: Gene: WBGene00022816
    Transcript: ZK783.1f.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: ZK783.1f.1:c.2478C>A
        HGVSp: CE47720:p.Ser826=
        cDNA_position: 2478
        CDS_position: 2478
        Protein_position: 826
        Exon_number: 8/23
        Codon_change: tcC/tcA
        Amino_acid_change: S
      ZK783.1j.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: ZK783.1j.1:c.2478C>A
        HGVSp: CE47737:p.Ser826=
        cDNA_position: 2478
        CDS_position: 2478
        Protein_position: 826
        Exon_number: 8/15
        Codon_change: tcC/tcA
        Amino_acid_change: S
      ZK783.1g.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: ZK783.1g.1:c.2478C>A
        HGVSp: CE47732:p.Ser826=
        cDNA_position: 2478
        CDS_position: 2478
        Protein_position: 826
        Exon_number: 8/23
        Codon_change: tcC/tcA
        Amino_acid_change: S
      ZK783.1h.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: ZK783.1h.1:c.2478C>A
        HGVSp: CE47716:p.Ser826=
        cDNA_position: 2478
        CDS_position: 2478
        Protein_position: 826
        Exon_number: 8/22
        Codon_change: tcC/tcA
        Amino_acid_change: S
      ZK783.1d.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: ZK783.1d.1:c.2478C>A
        HGVSp: CE47697:p.Ser826=
        cDNA_position: 2478
        CDS_position: 2478
        Protein_position: 826
        Exon_number: 8/23
        Codon_change: tcC/tcA
        Amino_acid_change: S
      ZK783.1e.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: ZK783.1e.1:c.2478C>A
        HGVSp: CE44082:p.Ser826=
        cDNA_position: 2478
        CDS_position: 2478
        Protein_position: 826
        Exon_number: 8/23
        Codon_change: tcC/tcA
        Amino_acid_change: S
      ZK783.1k.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: ZK783.1k.1:c.2484C>A
        HGVSp: CE47705:p.Ser828=
        cDNA_position: 2484
        CDS_position: 2484
        Protein_position: 828
        Exon_number: 8/25
        Codon_change: tcC/tcA
        Amino_acid_change: S
      ZK783.1a.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: ZK783.1a.1:c.2478C>A
        HGVSp: CE47717:p.Ser826=
        cDNA_position: 2478
        CDS_position: 2478
        Protein_position: 826
        Exon_number: 8/26
        Codon_change: tcC/tcA
        Amino_acid_change: S
      ZK783.1b.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: ZK783.1b.1:c.2478C>A
        HGVSp: CE47727:p.Ser826=
        cDNA_position: 2478
        CDS_position: 2478
        Protein_position: 826
        Exon_number: 8/25
        Codon_change: tcC/tcA
        Amino_acid_change: S
  Reference: WBPaper00037807
  Method: WGS_Pasadena_Quinlan