WormBase Tree Display for Variation: WBVar00059851
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WBVar00059851 | Name | Public_name | WBVar00059851 | ||
---|---|---|---|---|---|
Other_name | haw43092 | ||||
cewivar00196519 | |||||
F54D8.2.4:c.288+279T>A | |||||
F54D8.2.2:c.288+279T>A | |||||
F54D8.2.1:c.288+279T>A | |||||
F54D8.2.3:c.288+279T>A | |||||
HGVSg | CHROMOSOME_III:g.5082368T>A | ||||
Sequence_details | SMap | S_parent | Sequence | F54D8 | |
Flanking_sequences | tataatttggcgttttctcagtaat | aaaaaaaacgattggtctcaataaa | |||
Mapping_target | F54D8 | ||||
Type_of_mutation | Substitution | T | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00006519 | |||
Transcript | F54D8.2.4 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F54D8.2.4:c.288+279T>A | ||||
Intron_number | 3/4 | ||||
F54D8.2.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F54D8.2.2:c.288+279T>A | ||||
Intron_number | 3/4 | ||||
F54D8.2.3 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F54D8.2.3:c.288+279T>A | ||||
Intron_number | 3/4 | ||||
F54D8.2.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F54D8.2.1:c.288+279T>A | ||||
Intron_number | 3/4 | ||||
Remark | [20081124 db] this Variation was previously named hw43092 | ||||
Method | WGS_Hawaiian_Waterston |