WormBase Tree Display for Variation: WBVar00059666
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WBVar00059666 | Evidence | Paper_evidence | WBPaper00037807 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00059666 | |||
Other_name | haw43055 | ||||
cewivar00106471 | |||||
C26E6.7a.1:c.-121G>A | |||||
C26E6.7a.3:c.-129G>A | |||||
C26E6.7b.3:c.-121G>A | |||||
C26E6.7a.4:c.-173G>A | |||||
C26E6.7a.2:c.-125G>A | |||||
C26E6.7b.2:c.-129G>A | |||||
HGVSg | CHROMOSOME_III:g.4932451G>A | ||||
Sequence_details | SMap | S_parent | Sequence | C26E6 | |
Flanking_sequences | taaataataaaaaaaattgattaaa | ccgtatcatcgtgagaattaaaggc | |||
Mapping_target | C26E6 | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (36) | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01330374 | |||
WBVar01263257 | |||||
Status | Live | ||||
Affects | Gene | WBGene00016143 | |||
Transcript | C26E6.7b.2 | VEP_consequence | 5_prime_UTR_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | C26E6.7b.2:c.-129G>A | ||||
cDNA_position | 2 | ||||
Exon_number | 1/12 | ||||
C26E6.7a.2 | VEP_consequence | 5_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C26E6.7a.2:c.-125G>A | ||||
cDNA_position | 2 | ||||
Exon_number | 1/12 | ||||
C26E6.7a.4 | VEP_consequence | 5_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C26E6.7a.4:c.-173G>A | ||||
cDNA_position | 2 | ||||
Exon_number | 1/11 | ||||
C26E6.7b.3 | VEP_consequence | 5_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C26E6.7b.3:c.-121G>A | ||||
cDNA_position | 2 | ||||
Exon_number | 1/12 | ||||
C26E6.7a.3 | VEP_consequence | 5_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C26E6.7a.3:c.-129G>A | ||||
cDNA_position | 2 | ||||
Exon_number | 1/12 | ||||
C26E6.7a.1 | VEP_consequence | 5_prime_UTR_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | C26E6.7a.1:c.-121G>A | ||||
cDNA_position | 2 | ||||
Exon_number | 1/12 | ||||
Reference | WBPaper00037807 | ||||
Remark | [20081124 db] this Variation was previously named hw43055 | ||||
Method | WGS_Hawaiian_Waterston |