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WormBase Tree Display for Variation: WBVar00059666

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Name Class

WBVar00059666EvidencePaper_evidenceWBPaper00037807
NamePublic_nameWBVar00059666
Other_namehaw43055
cewivar00106471
C26E6.7a.1:c.-121G>A
C26E6.7a.3:c.-129G>A
C26E6.7b.3:c.-121G>A
C26E6.7a.4:c.-173G>A
C26E6.7a.2:c.-125G>A
C26E6.7b.2:c.-129G>A
HGVSgCHROMOSOME_III:g.4932451G>A
Sequence_detailsSMapS_parentSequenceC26E6
Flanking_sequencestaaataataaaaaaaattgattaaaccgtatcatcgtgagaattaaaggc
Mapping_targetC26E6
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (36)
LaboratoryRW
AX
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01330374
WBVar01263257
StatusLive
AffectsGeneWBGene00016143
TranscriptC26E6.7b.2VEP_consequence5_prime_UTR_variant
VEP_impactMODIFIER
HGVScC26E6.7b.2:c.-129G>A
cDNA_position2
Exon_number1/12
C26E6.7a.2VEP_consequence5_prime_UTR_variant
VEP_impactMODIFIER
HGVScC26E6.7a.2:c.-125G>A
cDNA_position2
Exon_number1/12
C26E6.7a.4VEP_consequence5_prime_UTR_variant
VEP_impactMODIFIER
HGVScC26E6.7a.4:c.-173G>A
cDNA_position2
Exon_number1/11
C26E6.7b.3VEP_consequence5_prime_UTR_variant
VEP_impactMODIFIER
HGVScC26E6.7b.3:c.-121G>A
cDNA_position2
Exon_number1/12
C26E6.7a.3VEP_consequence5_prime_UTR_variant
VEP_impactMODIFIER
HGVScC26E6.7a.3:c.-129G>A
cDNA_position2
Exon_number1/12
C26E6.7a.1VEP_consequence5_prime_UTR_variant
VEP_impactMODIFIER
HGVScC26E6.7a.1:c.-121G>A
cDNA_position2
Exon_number1/12
ReferenceWBPaper00037807
Remark[20081124 db] this Variation was previously named hw43055
MethodWGS_Hawaiian_Waterston