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WormBase Tree Display for Variation: WBVar00056748

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Name Class

WBVar00056748NamePublic_nameWBVar00056748
Other_namehaw92448
cewivar00260659
R10E8.4:n.1633T>G
R10E8.1a.4:c.-987A>C
R10E8.1a.5:c.-987A>C
R10E8.1a.2:c.-54+2905A>C
R10E8.1a.3:c.-987A>C
HGVSgCHROMOSOME_V:g.18249361T>G
Sequence_detailsSMapS_parentSequenceR10E8
Flanking_sequencesgtgaaggcggacatcacaaatgggtttccaagacgagaaggtcctcgaag
Mapping_targetR10E8
Type_of_mutationSubstitutionTG
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisMillion_mutation_project_reanalysis
WGS_Hawaiian_Waterston
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00011210
WBGene00011207
TranscriptR10E8.1a.5VEP_consequence5_prime_UTR_variant
VEP_impactMODIFIER
HGVScR10E8.1a.5:c.-987A>C
cDNA_position142
Exon_number1/9
R10E8.1a.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScR10E8.1a.2:c.-54+2905A>C
Intron_number2/7
R10E8.1a.4VEP_consequence5_prime_UTR_variant
VEP_impactMODIFIER
HGVScR10E8.1a.4:c.-987A>C
cDNA_position73
Exon_number2/10
R10E8.1a.3VEP_consequence5_prime_UTR_variant
VEP_impactMODIFIER
HGVScR10E8.1a.3:c.-987A>C
cDNA_position99
Exon_number2/10
PseudogeneR10E8.4VEP_consequencenon_coding_transcript_exon_variant
VEP_impactMODIFIER
HGVScR10E8.4:n.1633T>G
cDNA_position1633
Exon_number5/5
Remark[20081124 db] this Variation was previously named hw92448
MethodWGS_Hawaiian_Waterston