WormBase Tree Display for Variation: WBVar00056244

WBVar00056244 Name: Public_name: WBVar00056244
    Other_name: haw42371
      haw142799
      cewivar00105783
      F59A2.6d.1:c.1440-1551T>A
      F59A2.6c.1:c.1440-1551T>A
      F59A2.6b.1:c.1566-1551T>A
      F59A2.6a.1:c.1566-1551T>A
    HGVSg: CHROMOSOME_III:g.3415250T>A
  Sequence_details: SMap: S_parent: Sequence: F59A2
    Flanking_sequences: aaattgaaattctgaaatttatttt aaaaatgtgcaaaaccatgtgcaat
    Mapping_target: F59A2
    Type_of_mutation: Substitution: T A
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (27)
    Laboratory: RW
      AX
    Person: WBPerson1562
      WBPerson4037
    Analysis: WGS_Hawaiian_Waterston
      WGS_De_Bono
      WGS_Yanai
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar00562664
        WBVar01261826
    Status: Live
  Affects: Gene: WBGene00010306
    Transcript: F59A2.6a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F59A2.6a.1:c.1566-1551T>A
        Intron_number: 8/19
      F59A2.6c.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F59A2.6c.1:c.1440-1551T>A
        Intron_number: 7/18
      F59A2.6b.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F59A2.6b.1:c.1566-1551T>A
        Intron_number: 7/17
      F59A2.6d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: F59A2.6d.1:c.1440-1551T>A
        Intron_number: 7/17
  Reference: WBPaper00038208
    WBPaper00037807
  Remark: [20081124 db] this Variation was previously named hw42371
  Method: WGS_Hawaiian_Waterston