WormBase Tree Display for Variation: WBVar00056190
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WBVar00056190 | Name | Public_name | WBVar00056190 | ||
---|---|---|---|---|---|
Other_name | haw42360 | ||||
cewivar00196107 | |||||
F59A2.6b.1:c.967-467G>A | |||||
F59A2.6a.1:c.967-467G>A | |||||
F59A2.6c.1:c.967-467G>A | |||||
F59A2.6d.1:c.967-467G>A | |||||
HGVSg | CHROMOSOME_III:g.3409050G>A | ||||
Sequence_details | SMap | S_parent | Sequence | F59A2 | |
Flanking_sequences | tgcccgagaggagtccacaaaaaca | ttttttggcaaaaaaatctgaaatt | |||
Mapping_target | F59A2 | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
WBStrain00006625 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00010306 | |||
Transcript | F59A2.6a.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | F59A2.6a.1:c.967-467G>A | ||||
Intron_number | 5/19 | ||||
F59A2.6c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F59A2.6c.1:c.967-467G>A | ||||
Intron_number | 5/18 | ||||
F59A2.6b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F59A2.6b.1:c.967-467G>A | ||||
Intron_number | 4/17 | ||||
F59A2.6d.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | F59A2.6d.1:c.967-467G>A | ||||
Intron_number | 5/17 | ||||
Remark | [20081124 db] this Variation was previously named hw42360 | ||||
Method | WGS_Hawaiian_Waterston |