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WormBase Tree Display for Variation: WBVar00056190

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Name Class

WBVar00056190NamePublic_nameWBVar00056190
Other_namehaw42360
cewivar00196107
F59A2.6b.1:c.967-467G>A
F59A2.6a.1:c.967-467G>A
F59A2.6c.1:c.967-467G>A
F59A2.6d.1:c.967-467G>A
HGVSgCHROMOSOME_III:g.3409050G>A
Sequence_detailsSMapS_parentSequenceF59A2
Flanking_sequencestgcccgagaggagtccacaaaaacattttttggcaaaaaaatctgaaatt
Mapping_targetF59A2
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisMillion_mutation_project_reanalysis
WGS_Hawaiian_Waterston
WBStrain00006625From_analysisMillion_mutation_project_reanalysis
WBStrain00022930From_analysisMillion_mutation_project_reanalysis
WBStrain00023139From_analysisMillion_mutation_project_reanalysis
WBStrain00027648From_analysisMillion_mutation_project_reanalysis
WBStrain00027652From_analysisMillion_mutation_project_reanalysis
WBStrain00027660From_analysisMillion_mutation_project_reanalysis
WBStrain00027662From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00010306
TranscriptF59A2.6a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF59A2.6a.1:c.967-467G>A
Intron_number5/19
F59A2.6c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF59A2.6c.1:c.967-467G>A
Intron_number5/18
F59A2.6b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF59A2.6b.1:c.967-467G>A
Intron_number4/17
F59A2.6d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScF59A2.6d.1:c.967-467G>A
Intron_number5/17
Remark[20081124 db] this Variation was previously named hw42360
MethodWGS_Hawaiian_Waterston