WormBase Tree Display for Variation: WBVar00055950
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| WBVar00055950 | Evidence | Paper_evidence | WBPaper00038208 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00055950 | |||
| Other_name | haw42312 | ||||
| haw142757 | |||||
| cewivar00105679 | |||||
| F45H7.2d.1:c.-131+34T>C | |||||
| F45H7.2b.1:c.371+34T>C | |||||
| F45H7.2a.1:c.371+34T>C | |||||
| HGVSg | CHROMOSOME_III:g.3345668T>C | ||||
| Sequence_details | SMap | S_parent | Sequence | F45H7 | |
| Flanking_sequences | ttagcattgcctactttatgcctac | ttatgcctacctaatgcctacctga | |||
| Mapping_target | F45H7 | ||||
| Type_of_mutation | Substitution | T | C | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00000034 | From_analysis | Million_mutation_project_reanalysis | ||
| WBStrain00004599 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | |||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023018 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00024204 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| WBPerson4037 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar00562622 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00001559 | |||
| Transcript | F45H7.2a.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | F45H7.2a.1:c.371+34T>C | ||||
| Intron_number | 4/27 | ||||
| F45H7.2d.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F45H7.2d.1:c.-131+34T>C | ||||
| Intron_number | 2/25 | ||||
| F45H7.2b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F45H7.2b.1:c.371+34T>C | ||||
| Intron_number | 4/25 | ||||
| Reference | WBPaper00038208 | ||||
| Remark | [20081124 db] this Variation was previously named hw42312 | ||||
| Method | WGS_Hawaiian_Waterston |
