WormBase Tree Display for Variation: WBVar00054458
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WBVar00054458 | Name | Public_name | WBVar00054458 | ||
---|---|---|---|---|---|
Other_name | haw42014 | ||||
cewivar00195934 | |||||
R148.3a.2:c.33+48G>A | |||||
R148.3a.1:c.33+48G>A | |||||
R148.3b.1:c.33+48G>A | |||||
HGVSg | CHROMOSOME_III:g.3175461G>A | ||||
Sequence_details | SMap | S_parent | Sequence | R148 | |
Flanking_sequences | agtagaatttgttaattttgagcga | aaaatcgaaaattgaatgcgttttt | |||
Mapping_target | R148 | ||||
Type_of_mutation | Substitution | G | A | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
WGS_Hawaiian_Waterston | |||||
WBStrain00008273 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00022878 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | |||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00020102 | |||
Transcript | R148.3a.2 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | R148.3a.2:c.33+48G>A | ||||
Intron_number | 2/9 | ||||
R148.3b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | R148.3b.1:c.33+48G>A | ||||
Intron_number | 2/10 | ||||
R148.3a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | R148.3a.1:c.33+48G>A | ||||
Intron_number | 2/10 | ||||
Remark | [20081124 db] this Variation was previously named hw42014 | ||||
Method | WGS_Hawaiian_Waterston |