WormBase Tree Display for Variation: WBVar00054127

WBVar00054127 Evidence: Paper_evidence: WBPaper00002814
  Name: Public_name: cg57
    Other_name: K04H4.1a.1:c.3469C>T
      K04H4.1b.1:c.2698C>T
      CE48054:p.Gln1157Ter
      CE36390:p.Gln900Ter
    HGVSg: CHROMOSOME_III:g.9339449G>A
  Sequence_details: SMap: S_parent: Sequence: K04H4
    Flanking_sequences: tctccagggcaaccaggttatcctgggcag aaggacgtgaaggagagaagggatatccag
    Mapping_target: K04H4
    Type_of_mutation: Substitution: c t Paper_evidence: WBPaper00002814
    SeqStatus: Sequenced
  Variation_type: Allele
  Origin: Species: Caenorhabditis elegans
    Laboratory: CH
    Status: Live
  Affects: Gene: WBGene00001263
    Transcript: K04H4.1a.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: K04H4.1a.1:c.3469C>T
        HGVSp: CE48054:p.Gln1157Ter
        cDNA_position: 3518
        CDS_position: 3469
        Protein_position: 1157
        Exon_number: 11/14
        Codon_change: Caa/Taa
        Amino_acid_change: Q/*
      K04H4.1b.1 VEP_consequence: stop_gained
        VEP_impact: HIGH
        HGVSc: K04H4.1b.1:c.2698C>T
        HGVSp: CE36390:p.Gln900Ter
        cDNA_position: 2698
        CDS_position: 2698
        Protein_position: 900
        Exon_number: 8/10
        Codon_change: Caa/Taa
        Amino_acid_change: Q/*
  Genetics: Interpolated_map_position: III 0.421361
  Reference: WBPaper00002814
  Method: Substitution_allele