WormBase Tree Display for Variation: WBVar00054046
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| WBVar00054046 | Evidence | Paper_evidence | WBPaper00004703 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00054046 | |||
| Other_name | pas22406 | ||||
| snp_F41D9[1] | |||||
| haw105597 | |||||
| cewivar00059445 | |||||
| F41D9.1.1:c.*19G>T | |||||
| HGVSg | CHROMOSOME_X:g.8382557G>T | ||||
| Sequence_details | SMap | S_parent | Sequence | F41D9 | |
| Flanking_sequences | tgagtcagttctcgttcaatctcagcatgtcattcgaaattgagggaatagacaaaaagaagcggaagtttgttaatggggtaagtgagataacaataaaagatgcaatggtaaatttttcattgcaaaacttttttgcagctacttacaagtcaaaaaaagaagattctctcgacggttgtgtcttcttcgcaggacaataaacaaaacggagaagaaccattaaagcaaggtgtcactgatatgctgataaaacatcatttgttcagttgggacttgtaatgtcttcatatcttaatt | ttagcatattaccatcgtgcatgaaatatctcccatttctcaattttttgggtatcgttctggttttatgatctcgtaatcttctatatttgatacctttcaattgtgtcattgatctagttggcagcatcgaataaacacttaaaatccagtatattatttattcggagacaacgagggctggtgagaaagagagagagagaattaggtacagacaataaagaaaatttctgatttaataagatcaaaacacatttcgaattaaggagaaacgattgggacgtggcaggagatcaaaat | |||
| Mapping_target | F41D9 | ||||
| Type_of_mutation | Substitution | G | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (27) | |||||
| Laboratory | RW | ||||
| Person | WBPerson6900 | ||||
| WBPerson1562 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| SNP_Wicks | |||||
| WGS_Hawaiian_Waterston | |||||
| History | Acquires_merge | WBVar00081237 | |||
| WBVar00244703 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00018281 | |||
| Transcript | F41D9.1.1 | VEP_consequence | 3_prime_UTR_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | F41D9.1.1:c.*19G>T | ||||
| cDNA_position | 2547 | ||||
| Exon_number | 17/17 | ||||
| Reference | WBPaper00004703 | ||||
| Method | WGS_Pasadena_Quinlan |
