WormBase Tree Display for Variation: WBVar00053930
expand all nodes | collapse all nodes | view schema
WBVar00053930 | Name | Public_name | WBVar00053930 | ||
---|---|---|---|---|---|
Other_name | haw91884 | ||||
cewivar00259616 | |||||
E01B7.1.2:c.174C>T | |||||
E01B7.1.1:c.174C>T | |||||
CE42799:p.Tyr58= | |||||
HGVSg | CHROMOSOME_V:g.17925449C>T | ||||
Sequence_details | SMap | S_parent | Sequence | E01B7 | |
Flanking_sequences | cccgtggagatttggagcaacaata | cgattattgatgaaagccggtgaac | |||
Mapping_target | E01B7 | ||||
Type_of_mutation | Substitution | C | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (21) | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
Status | Live | ||||
Affects | Gene | WBGene00008441 | |||
Transcript | E01B7.1.1 | VEP_consequence | synonymous_variant | ||
VEP_impact | LOW | ||||
HGVSc | E01B7.1.1:c.174C>T | ||||
HGVSp | CE42799:p.Tyr58= | ||||
cDNA_position | 202 | ||||
CDS_position | 174 | ||||
Protein_position | 58 | ||||
Exon_number | 3/19 | ||||
Codon_change | taC/taT | ||||
Amino_acid_change | Y | ||||
E01B7.1.2 | VEP_consequence | synonymous_variant | |||
VEP_impact | LOW | ||||
HGVSc | E01B7.1.2:c.174C>T | ||||
HGVSp | CE42799:p.Tyr58= | ||||
cDNA_position | 218 | ||||
CDS_position | 174 | ||||
Protein_position | 58 | ||||
Exon_number | 4/20 | ||||
Codon_change | taC/taT | ||||
Amino_acid_change | Y | ||||
Remark | [20081124 db] this Variation was previously named hw91884 | ||||
Method | WGS_Hawaiian_Waterston |