WormBase Tree Display for Variation: WBVar00053518
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| WBVar00053518 | Evidence | Paper_evidence | WBPaper00037807 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00053518 | |||
| Other_name | haw41826 | ||||
| cewivar00195818 | |||||
| H06I04.3a.1:c.1318+1368T>C | |||||
| H06I04.3c.1:c.1318+1368T>C | |||||
| H06I04.3b.1:c.1318+1368T>C | |||||
| HGVSg | CHROMOSOME_III:g.3078058T>C | ||||
| Sequence_details | SMap | S_parent | Sequence | H06I04 | |
| Flanking_sequences | tactcaaaaaaaaacctgaaaacgc | cagaaatacatctgattttcatgaa | |||
| Mapping_target | H06I04 | ||||
| Type_of_mutation | Substitution | T | C | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
| Million_mutation_project_reanalysis | |||||
| WBStrain00006637 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022850 | From_analysis | WGS_De_Bono | |||
| Million_mutation_project_reanalysis | |||||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023192 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| AX | |||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01329631 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00019168 | |||
| Transcript | H06I04.3b.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | H06I04.3b.1:c.1318+1368T>C | ||||
| Intron_number | 6/7 | ||||
| H06I04.3a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | H06I04.3a.1:c.1318+1368T>C | ||||
| Intron_number | 7/11 | ||||
| H06I04.3c.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | H06I04.3c.1:c.1318+1368T>C | ||||
| Intron_number | 6/9 | ||||
| Reference | WBPaper00037807 | ||||
| Remark | [20081124 db] this Variation was previously named hw41826 | ||||
| Method | WGS_Hawaiian_Waterston |
