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WormBase Tree Display for Variation: WBVar00053373

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Name Class

WBVar00053373NamePublic_nameWBVar00053373
Other_namepas3759
haw41797
haw142412
cewivar00420595
H06I04.3c.1:c.528+111T>A
H06I04.3a.1:c.528+111T>A
H06I04.3b.1:c.528+111T>A
HGVSgCHROMOSOME_III:g.3072307T>A
Sequence_detailsSMapS_parentSequenceH06I04
Flanking_sequencesattgacaaaaaatattttagactctcaaaatctgaaaaattgcttaaaaa
Mapping_targetH06I04
Type_of_mutationSubstitutionTA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_Hawaiian_Waterston
WGS_Yanai
WBStrain00004604From_analysisWGS_Pasadena_Quinlan
WBStrain00006642From_analysisWGS_De_Bono
WBStrain00022850From_analysisWGS_De_Bono
WBStrain00023139From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
WBPerson6900
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
WGS_Pasadena_Quinlan
HistoryAcquires_mergeWBVar01329609
WBVar01261110
WBVar00562277
WBVar00098900
StatusLive
AffectsGeneWBGene00019168
TranscriptH06I04.3b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScH06I04.3b.1:c.528+111T>A
Intron_number4/7
H06I04.3a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScH06I04.3a.1:c.528+111T>A
Intron_number5/11
H06I04.3c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScH06I04.3c.1:c.528+111T>A
Intron_number4/9
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw41797
MethodWGS_Hawaiian_Waterston