WormBase Tree Display for Variation: WBVar00053253
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WBVar00053253 | Evidence | Paper_evidence | WBPaper00040707 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00053253 | |||
Other_name | haw41773 | ||||
cewivar00195783 | |||||
H06I04.6b.3:c.717+153G>C | |||||
H06I04.6b.2:c.717+153G>C | |||||
H06I04.6b.1:c.717+153G>C | |||||
H06I04.6a.3:c.201+153G>C | |||||
H06I04.6a.1:c.201+153G>C | |||||
H06I04.6a.2:c.201+153G>C | |||||
HGVSg | CHROMOSOME_III:g.3062191C>G | ||||
Sequence_details | SMap | S_parent | Sequence | H06I04 | |
Flanking_sequences | tggcctagaaatccaacctaggcca | caacttcatttaggtataactttgg | |||
Mapping_target | H06I04 | ||||
Type_of_mutation | Substitution | C | G | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
Million_mutation_project_reanalysis | |||||
WGS_Andersen | |||||
Laboratory | RW | ||||
QX | |||||
Person | WBPerson1562 | ||||
WBPerson1730 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
Million_mutation_project_reanalysis | |||||
WGS_Andersen | |||||
History | Acquires_merge | WBVar01444745 | |||
Status | Live | ||||
Affects | Gene | WBGene00019170 | |||
Transcript | H06I04.6b.2 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | H06I04.6b.2:c.717+153G>C | ||||
Intron_number | 5/6 | ||||
H06I04.6b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | H06I04.6b.1:c.717+153G>C | ||||
Intron_number | 5/7 | ||||
H06I04.6a.3 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | H06I04.6a.3:c.201+153G>C | ||||
Intron_number | 4/6 | ||||
H06I04.6b.3 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | H06I04.6b.3:c.717+153G>C | ||||
Intron_number | 5/7 | ||||
H06I04.6a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | H06I04.6a.1:c.201+153G>C | ||||
Intron_number | 5/7 | ||||
H06I04.6a.2 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | H06I04.6a.2:c.201+153G>C | ||||
Intron_number | 3/5 | ||||
Reference | WBPaper00040707 | ||||
Remark | [20081124 db] this Variation was previously named hw41773 | ||||
Method | WGS_Hawaiian_Waterston |