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WormBase Tree Display for Variation: WBVar00052913

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Name Class

WBVar00052913NamePublic_nameWBVar00052913
Other_namehaw41705
cewivar00149783
Y55D5A.5a.1:c.5446-47T>A
Y55D5A.5g.1:c.1924-47T>A
Y55D5A.5e.1:c.5218-47T>A
Y55D5A.5d.1:c.5305-47T>A
Y55D5A.5f.1:c.3016-47T>A
Y55D5A.5c.1:c.5692-47T>A
HGVSgCHROMOSOME_III:g.2996061A>T
Sequence_detailsSMapS_parentSequenceY55D5A
Flanking_sequencesatatttgtgtttgaaaaaaaaaaaattttttttggaaatttactcgaatt
Mapping_targetY55D5A
Type_of_mutationSubstitutionAT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004600From_analysisMillion_mutation_project_reanalysis
WBStrain00004602From_analysisMillion_mutation_project_reanalysis
WGS_Hawaiian_Waterston
WBStrain00006625From_analysisMillion_mutation_project_reanalysis
WBStrain00027652From_analysisMillion_mutation_project_reanalysis
WBStrain00031113From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
PersonWBPerson1562
AnalysisWGS_Hawaiian_Waterston
Million_mutation_project_reanalysis
StatusLive
AffectsGeneWBGene00000898
TranscriptY55D5A.5g.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5g.1:c.1924-47T>A
Intron_number3/3
Y55D5A.5e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5e.1:c.5218-47T>A
Intron_number14/14
Y55D5A.5f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5f.1:c.3016-47T>A
Intron_number7/7
Y55D5A.5a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5a.1:c.5446-47T>A
Intron_number17/18
Y55D5A.5c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5c.1:c.5692-47T>A
Intron_number19/20
Y55D5A.5d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.5d.1:c.5305-47T>A
Intron_number15/15
Remark[20081124 db] this Variation was previously named hw41705
MethodWGS_Hawaiian_Waterston