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WormBase Tree Display for Variation: WBVar00052893

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Name Class

WBVar00052893EvidencePaper_evidenceWBPaper00038208
NamePublic_nameWBVar00052893
Other_namehaw41701
haw142327
cewivar00195720
Y55D5A.1b.1:c.43-250G>A
Y55D5A.1b.3:c.43-250G>A
Y55D5A.1b.2:c.43-250G>A
Y55D5A.1b.4:c.43-250G>A
Y55D5A.1a.1:c.412-250G>A
HGVSgCHROMOSOME_III:g.2986814G>A
Sequence_detailsSMapS_parentSequenceY55D5A
Flanking_sequencesattaatttcaaatctttaaattaaaaattcatcatcagcgtctcaagagc
Mapping_targetY55D5A
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
LaboratoryRW
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00562192
StatusLive
AffectsGeneWBGene00021915
TranscriptY55D5A.1b.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.1b.3:c.43-250G>A
Intron_number3/5
Y55D5A.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.1b.1:c.43-250G>A
Intron_number5/7
Y55D5A.1b.4VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.1b.4:c.43-250G>A
Intron_number2/3
Y55D5A.1b.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.1b.2:c.43-250G>A
Intron_number4/6
Y55D5A.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY55D5A.1a.1:c.412-250G>A
Intron_number5/7
ReferenceWBPaper00038208
Remark[20081124 db] this Variation was previously named hw41701
MethodWGS_Hawaiian_Waterston