WormBase Tree Display for Variation: WBVar00052777
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| WBVar00052777 | Name | Public_name | WBVar00052777 | ||
|---|---|---|---|---|---|
| Other_name | CE4-1 | ||||
| haw59414 | |||||
| haw154488 | |||||
| cewivar00209225 | |||||
| ZK792.8.1:c.216T>C | |||||
| CE24740:p.Val72= | |||||
| HGVSg | CHROMOSOME_IV:g.11668265T>C | ||||
| Sequence_details | SMap | S_parent | Sequence | ZK792 | |
| Flanking_sequences | aattgtaagttccagactacatatgaagcgttaaaatgaataatataccagacgattttaaaaagattgcaagttccagtcgattaccaagaaaatactgtagctcagaatcctcattatcagatgatgatggacacgaaattgagcatgttttgaagcacggagccccggaagaagcgttaactccggatacagaaagaatggttgtattgggccaggatgtagttcaatctgcacctgcaagccttgt | ccgggtggcaatctttcatggatgagcaaaattaaatcgtgagtttctagaaattttatgctttatttagctggaatgttcctagttaaaaagtttaacaggatcatttctcatagtctaacaattatgctcgtataagttttaaaaattaatcatcatcaaatattttggtaagttttggttctatttaggcgcgcacaaaagtacgtactatgatagaattcctacaaactgtcctattttccagtaa | |||
| Mapping_target | ZK792 | ||||
| Type_of_mutation | Substitution | t | c | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Confirmed_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | SNP_Swan | ||
| WGS_Hawaiian_Waterston | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| Laboratory | RW | ||||
| Person | WBPerson4037 | ||||
| WBPerson1562 | |||||
| Analysis | SNP_Swan | ||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Hawaiian_Waterston | |||||
| History | Acquires_merge | WBVar00574353 | |||
| WBVar00192138 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00014080 | |||
| Transcript | ZK792.8.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | ZK792.8.1:c.216T>C | ||||
| HGVSp | CE24740:p.Val72= | ||||
| cDNA_position | 242 | ||||
| CDS_position | 216 | ||||
| Protein_position | 72 | ||||
| Exon_number | 2/12 | ||||
| Codon_change | gtT/gtC | ||||
| Amino_acid_change | V | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00005369 | |||||
| Method | SNP_Swan |
