WormBase Tree Display for Variation: WBVar00052732
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| WBVar00052732 | Name | Public_name | WBVar00052732 | ||
|---|---|---|---|---|---|
| Other_name | CE3-198 | ||||
| pas29386 | |||||
| haw47815 | |||||
| haw146508 | |||||
| cewivar00026243 | |||||
| C24H11.8b.1:c.1702+11C>A | |||||
| C24H11.8a.1:c.1702+11C>A | |||||
| HGVSg | CHROMOSOME_III:g.11801666C>A | ||||
| Sequence_details | SMap | S_parent | Sequence | C24H11 | |
| Flanking_sequences | catttctggcggagcttggctgttctcctggtgggagaattggaatggatttgatggtgcctattattgctttattactttgaggtttgtaatttaacagttttttaatcaaaaaaaaactatatttttccagtacaattggttttggagacatcgtacctggtcaggctcttgacgaagggagccaggagaaacttgtagtttgtgcgctttatctgctgtttggaatggctcttattggtaaggtata | gctggattttaaagaaaattaagtatattttagcgatgtgcttcaagttaatgcaagacgatgttgtacaaaaggcgagatggctcgggcagaaaattgggattcttggtgagtggttttgaatgaatatagattgattatagcaatagaaaatggagagcgccagtggaaaaattgtctcaaaacatagctacgacaccaaaatgatcaaatatcatattaaaaaaattatttgaaaaattctaaattc | |||
| Mapping_target | C24H11 | ||||
| Type_of_mutation | Substitution | c | a | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Confirmed_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (29) | |||||
| Laboratory | AX | ||||
| RW | |||||
| Person | WBPerson6900 | ||||
| WBPerson4037 | |||||
| WBPerson1562 | |||||
| Analysis | SNP_Swan | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Hawaiian_Waterston | |||||
| WGS_Pasadena_Quinlan | |||||
| History | Acquires_merge | WBVar01270778 | |||
| WBVar00180539 | |||||
| WBVar00217610 | |||||
| WBVar00566373 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00006690 | |||
| Transcript | C24H11.8b.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | C24H11.8b.1:c.1702+11C>A | ||||
| Intron_number | 12/15 | ||||
| C24H11.8a.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | C24H11.8a.1:c.1702+11C>A | ||||
| Intron_number | 13/16 | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| WBPaper00005369 | |||||
| Method | SNP_Swan |
