WormBase Tree Display for Variation: WBVar00052641
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| WBVar00052641 | Evidence | Paper_evidence | WBPaper00004703 | ||
|---|---|---|---|---|---|
| Name | Public_name | WBVar00052641 | |||
| Other_name | pas22125 | ||||
| snp_K07E3[4] | |||||
| cewivar00059014 | |||||
| K07E3.1.1:c.582T>G | |||||
| CE53543:p.Val194= | |||||
| HGVSg | CHROMOSOME_X:g.8111204T>G | ||||
| Sequence_details | SMap | S_parent | Sequence | K07E3 | |
| Flanking_sequences | gaacaagccacgtcagcatttcggagtcgaattgagcggaaatccgattatgtcaatggcgccgattactgaacttgccacaaacgggggattgccaacatcttcaacaatctactcgccacagtccgaggagtactacactcaatcggcaaataataggtactacgacaaaatttttggagatcataagaccttcgacaacatcatgcagaaaaacagccggtaacgctgcaaattacttaaacatttttttgaccagttattttctttcagaactccaaacatgccggtaccaaaagt | catccaatgccataccatccacaaatgaataaaggcaatcactaccaacaacttcagcaatatacacaacctccgccagtttataatgcataccagccacccccacaaatgcactataacgcacaaccgagaatggcatatcaggttgcataccaagcggttcctcaattcgttcatatgcctgttcaaatggcgccagtggtaatgcaagacaatgtttacgccggcaccagttatcgacaagtgtatattccgcccgcatattccgcgaaaagatatggcagtgaaagtcgttctcgc | |||
| Mapping_target | K07E3 | ||||
| Type_of_mutation | Substitution | T | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (34) | |||||
| Person | WBPerson6900 | ||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| Million_mutation_project_reanalysis | |||||
| SNP_Wicks | |||||
| History | Acquires_merge | WBVar00245494 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00019490 | |||
| Transcript | K07E3.1.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | K07E3.1.1:c.582T>G | ||||
| HGVSp | CE53543:p.Val194= | ||||
| cDNA_position | 592 | ||||
| CDS_position | 582 | ||||
| Protein_position | 194 | ||||
| Exon_number | 5/9 | ||||
| Codon_change | gtT/gtG | ||||
| Amino_acid_change | V | ||||
| Reference | WBPaper00004703 | ||||
| Method | WGS_Pasadena_Quinlan |
