WormBase Tree Display for Variation: WBVar00052637
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| WBVar00052637 | Name | Public_name | WBVar00052637 | ||
|---|---|---|---|---|---|
| Other_name | CE3-161 | ||||
| pas4530 | |||||
| haw144018 | |||||
| cewivar00107377 | |||||
| T20B12.9.1:c.213C>T | |||||
| CE46014:p.Ile71= | |||||
| HGVSg | CHROMOSOME_III:g.7394794G>A | ||||
| Sequence_details | SMap | S_parent | Sequence | T20B12 | |
| Flanking_sequences | atcacaaatgtattttcacttggagatgaatgaattgaactggatttcgagttgatgatacatgtgtcaggtgtccaaattttctttcggaagtcagactggaataaaaaatatagaaatttatacaaaattatacttctcctacaaccttcaaagtgatatttgttgcacaaacattgagatgtttgaaggataatcgtggatcctgccatatttcactgtacatcacatccaatgaaaagtcacccgt | atttcagaaatacccgatacaccctgaacatgaagctcaattgtcacattgactccttctgcttcaggcaataaatgtgtgtcatagtcggtgagcagggtatcgataagttttccgagatttatgctggaaatgtttttgttgtagaaaaatcagaacatttttcaaaaattctaaatattcaaaaagctttcaaaatgtgttcctaccttttacttgctttatttgcatgatcaaaataaaaaatcct | |||
| Mapping_target | T20B12 | ||||
| Type_of_mutation | Substitution | g | a | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Confirmed_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (26) | |||||
| Laboratory | AX | ||||
| Person | WBPerson6900 | ||||
| WBPerson4037 | |||||
| Analysis | SNP_Swan | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Pasadena_Quinlan | |||||
| History | Acquires_merge | WBVar01265443 | |||
| WBVar00099671 | |||||
| WBVar01330756 | |||||
| WBVar00563883 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00020605 | |||
| Transcript | T20B12.9.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | T20B12.9.1:c.213C>T | ||||
| HGVSp | CE46014:p.Ile71= | ||||
| cDNA_position | 283 | ||||
| CDS_position | 213 | ||||
| Protein_position | 71 | ||||
| Exon_number | 3/13 | ||||
| Codon_change | atC/atT | ||||
| Amino_acid_change | I | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| WBPaper00005369 | |||||
| Method | SNP_Swan |
