WormBase Tree Display for Variation: WBVar00052533
expand all nodes | collapse all nodes | view schema
| WBVar00052533 | Name | Public_name | WBVar00052533 | ||
|---|---|---|---|---|---|
| Other_name | haw41629 | ||||
| cewivar00195652 | |||||
| CE43982:p.Glu890= | |||||
| R10F2.6.1:c.2670G>A | |||||
| HGVSg | CHROMOSOME_III:g.2938429C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | R10F2 | |
| Flanking_sequences | gatgcagagattctcgattcattct | tcgcaaattctaacgtacggctgcc | |||
| Mapping_target | R10F2 | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
| WGS_Hawaiian_Waterston | |||||
| WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023139 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027648 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027660 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027662 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00019997 | |||
| Transcript | R10F2.6.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | R10F2.6.1:c.2670G>A | ||||
| HGVSp | CE43982:p.Glu890= | ||||
| cDNA_position | 2757 | ||||
| CDS_position | 2670 | ||||
| Protein_position | 890 | ||||
| Exon_number | 12/14 | ||||
| Codon_change | gaG/gaA | ||||
| Amino_acid_change | E | ||||
| Remark | [20081124 db] this Variation was previously named hw41629 | ||||
| Method | WGS_Hawaiian_Waterston |
