WormBase Tree Display for Variation: WBVar00051891
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| WBVar00051891 | Name | Public_name | WBVar00051891 | ||
|---|---|---|---|---|---|
| Other_name | pas21975 | ||||
| snp_T19B4[1] | |||||
| haw6955 | |||||
| haw117238 | |||||
| cewivar00000958 | |||||
| T19B4.7.1:c.103+198A>T | |||||
| HGVSg | CHROMOSOME_I:g.5690940T>A | ||||
| Sequence_details | SMap | S_parent | Sequence | T19B4 | |
| Flanking_sequences | agtcaaaattaactaaaattttaatttttccctaaaccgccataatttagaaaacgttcaagatgtctctcttctggggacaaaaaaatcgctgctccatctttaaggtgtgaaggaactaaaagattgctgaacaactctgctagatcggaactcgaaaattgagaataattttgaaagaaggttttttcaaagtaaaaccattaattcgacgataaactaagtgttttataggtaagagtattaaaaaaaacgtaacttttcttggatttgtattatttttatggagtcaattttttt | aaaaatagccacaaggtagttcagtgccaagtattgactttaagatgatttttatttatatttttctattttcaaaattccattcttgaatcgataaattatgttgccggtgactgacaccttgacagaatgccagatggtcatcttccttcccccattttaatatatttttgaattcaaatgtgaaaaactctcaccattatcaatcgatcgacgatgatgtttccgtgttgtggcatgagtagatgacagataaactgtcagaattataagaatgaaacctgaaaattataaatagta | |||
| Mapping_target | T19B4 | ||||
| Type_of_mutation | Substitution | T | A | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (41) | |||||
| Laboratory | AX | ||||
| RW | |||||
| Person | WBPerson6900 | ||||
| WBPerson4037 | |||||
| WBPerson1562 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| SNP_Wicks | |||||
| WGS_Hawaiian_Waterston | |||||
| History | Acquires_merge | WBVar00153705 | |||
| WBVar00537103 | |||||
| WBVar00246288 | |||||
| WBVar01282871 | |||||
| WBVar01344531 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00006776 | |||
| Transcript | T19B4.7.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | T19B4.7.1:c.103+198A>T | ||||
| Intron_number | 3/18 | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00004703 | |||||
| WBPaper00037807 | |||||
| Method | WGS_Pasadena_Quinlan |
