WormBase Tree Display for Variation: WBVar00051882
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| WBVar00051882 | Name | Public_name | WBVar00051882 | ||
|---|---|---|---|---|---|
| Other_name | CE1-209 | ||||
| haw12790 | |||||
| haw121375 | |||||
| cewivar00173388 | |||||
| W02A11.3.1:c.388-58A>T | |||||
| W02A11.2.1:c.-1+2269T>A | |||||
| HGVSg | CHROMOSOME_I:g.12738906A>T | ||||
| Sequence_details | SMap | S_parent | Sequence | W02A11 | |
| Flanking_sequences | tgtagcttttttgattcacaagataggcatgggtgatcccactggaagatctgataactgaaagagaatccttatgatcctcatctaggtagcctaggataagcatcggaacaggaggatctgcctctgagatctttgggatcctcggatataccacttgagcttaggattttcagaaagatcagtagattctagcgggttacgatctttatattcggctaggatcctgagctagatcaactagtctttt | ctataaaaacatggttttaaggatccttgggatattatcaatctttaataatttcaggaactgctcgaccaatcatcactcgacggtatcaccttcgaaacatccggaacgaacacttccgatgaacctcattcacaaataatcacgtcaaattcttcatctctaccttcaacgtcagcatcatcgtcatcagaccgccctcgagccatgcgcagcaaccaggaaatgcgacaagctcgacgagcccgtc | |||
| Mapping_target | W02A11 | ||||
| Type_of_mutation | Substitution | a | t | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Confirmed_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | SNP_Swan | ||
| WGS_De_Bono | |||||
| WGS_Hawaiian_Waterston | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| Laboratory | AX | ||||
| RW | |||||
| Person | WBPerson4037 | ||||
| WBPerson1562 | |||||
| Analysis | SNP_Swan | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Hawaiian_Waterston | |||||
| History | Acquires_merge | WBVar00159540 | |||
| WBVar00541240 | |||||
| WBVar01352765 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00012194 | |||
| WBGene00012193 | |||||
| Transcript | W02A11.2.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | W02A11.2.1:c.-1+2269T>A | ||||
| Intron_number | 1/6 | ||||
| W02A11.3.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | W02A11.3.1:c.388-58A>T | ||||
| Intron_number | 3/6 | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| WBPaper00005369 | |||||
| Method | SNP_Swan |
