WormBase Tree Display for Variation: WBVar00051807
expand all nodes | collapse all nodes | view schema
| WBVar00051807 | Name | Public_name | WBVar00051807 | ||
|---|---|---|---|---|---|
| Other_name | CE1-175 | ||||
| cewivar00066006 | |||||
| F53G12.4.1:c.502-90A>G | |||||
| HGVSg | CHROMOSOME_I:g.136145A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | F53G12 | |
| Flanking_sequences | acgagtgagttgcgttaaataatttttttttgaaatatttaacaaaagtcgacaaggcgattttttaaaatcgatgtttcgcgacttttattcaaaagaaaaatttcaatgccctaaatcactcaaatgatgattaaaaaagtatttgcgcgcgcgcgtaaaatttagtgccagcgtatgacactatgtggtgcaaacttcactccgggtccgacactttttggattttgcgcatcgctataaagatttc | gatcgcggcgtgagagcggcgtttgcggcgccgacatgagagtcctactttcctacttttcttggcaaaaaaatcgatcgatttttcagctcgcacgtctatccaaccaggcagaagacgattccgacgattcatcgtcctcctccgactcttccacgtcatccgcgtcgtcatcttccgaggagaagttgactttttcggatatcttggggaaacccacagcagctggcgcggagaaaatgatcgaact | |||
| Mapping_target | F53G12 | ||||
| Type_of_mutation | Substitution | a | g | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Confirmed_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (30) | |||||
| Laboratory | AX | ||||
| Analysis | SNP_Swan | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| History | Acquires_merge | WBVar01276585 | |||
| Status | Live | ||||
| Affects | Gene | WBGene00018772 | |||
| Transcript | F53G12.4.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | F53G12.4.1:c.502-90A>G | ||||
| Intron_number | 4/5 | ||||
| Reference | WBPaper00037807 | ||||
| WBPaper00005369 | |||||
| Method | SNP_Swan |
