WormBase Tree Display for Variation: WBVar00051767
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| WBVar00051767 | Name | Public_name | WBVar00051767 | ||
|---|---|---|---|---|---|
| Other_name | CE1-167 | ||||
| haw6668 | |||||
| cewivar00165901 | |||||
| F28B3.4i.1:c.627+146T>A | |||||
| F28B3.4b.1:c.705+146T>A | |||||
| F28B3.4j.1:c.627+146T>A | |||||
| F28B3.4g.1:c.705+146T>A | |||||
| HGVSg | CHROMOSOME_I:g.4939124T>A | ||||
| Sequence_details | SMap | S_parent | Sequence | F28B3 | |
| Flanking_sequences | actgcagaacgacgtgctgctgctgcttcaggtggtggtacaaggaaagaacgagctgtagaggatatgcttcgacttgttcaagagaatcgagatcggcatgatgtgagttttcgaattttaaattttgtgtaaaaaacagagtttgtttttttctcattttttgggaaactattatcaaaattccaactttaaaaaaccacaggaataaattttttaaattttatttttcattagacctaccaacttt | aaaaaaacttgaaaatacgagacgaacagcgaaatcgctggcatctagataaatattttaacatttggattttaataaatttaggaagtagagtaacgttaatattttttctttcctttctgaaaaaatttgcaaaaaatgttcaaatggctaattggaagagaaaaccattttaaacgtttcccaaaaaaaatctttgaattttggcgataaacgttcagattttttttttgcaaaattgaaaaaaaca | |||
| Mapping_target | F28B3 | ||||
| Type_of_mutation | Substitution | t | a | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Confirmed_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | SNP_Swan | ||
| WGS_De_Bono | |||||
| WGS_Hawaiian_Waterston | |||||
| Million_mutation_project_reanalysis | |||||
| WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022850 | From_analysis | WGS_De_Bono | |||
| Million_mutation_project_reanalysis | |||||
| WBStrain00023018 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027652 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | AX | ||||
| RW | |||||
| Person | WBPerson1562 | ||||
| Analysis | SNP_Swan | ||||
| WGS_De_Bono | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Hawaiian_Waterston | |||||
| History | Acquires_merge | WBVar00153418 | |||
| WBVar01344165 | |||||
| WBVar01282619 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00305377 | |||
| WBGene00017885 | |||||
| Transcript | F28B3.4g.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | F28B3.4g.1:c.705+146T>A | ||||
| Intron_number | 6/17 | ||||
| F28B3.4b.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F28B3.4b.1:c.705+146T>A | ||||
| Intron_number | 6/17 | ||||
| F28B3.4j.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F28B3.4j.1:c.627+146T>A | ||||
| Intron_number | 3/13 | ||||
| F28B3.4i.1 | VEP_consequence | intron_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F28B3.4i.1:c.627+146T>A | ||||
| Intron_number | 3/13 | ||||
| F28B3.12 | |||||
| Reference | WBPaper00037807 | ||||
| WBPaper00005369 | |||||
| Method | SNP_Swan |
