WormBase Tree Display for Variation: WBVar00049813
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| WBVar00049813 | Name | Public_name | WBVar00049813 | ||
|---|---|---|---|---|---|
| Other_name | pas2489 | ||||
| haw41085 | |||||
| haw141911 | |||||
| cewivar00103813 | |||||
| Y71H2B.11.2:c.168A>G | |||||
| CE34427:p.Gly56= | |||||
| Y71H2B.11.3:c.168A>G | |||||
| Y71H2B.11.1:c.168A>G | |||||
| HGVSg | CHROMOSOME_III:g.2605397A>G | ||||
| Sequence_details | SMap | S_parent | Sequence | Y71H2B | |
| Flanking_sequences | atactgctttattcgatgatgatgg | ttctacaaaatttacaattttttat | |||
| Mapping_target | Y71H2B | ||||
| Type_of_mutation | Substitution | A | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (66) | |||||
| Laboratory | RW | ||||
| QX | |||||
| AX | |||||
| Person | WBPerson1562 | ||||
| WBPerson6900 | |||||
| WBPerson4037 | |||||
| WBPerson1730 | |||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| WGS_Pasadena_Quinlan | |||||
| WGS_Andersen | |||||
| History | Acquires_merge | WBVar01259958 | |||
| WBVar00561776 | |||||
| WBVar00097630 | |||||
| WBVar01444477 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00022198 | |||
| Transcript | Y71H2B.11.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | Y71H2B.11.1:c.168A>G | ||||
| HGVSp | CE34427:p.Gly56= | ||||
| cDNA_position | 384 | ||||
| CDS_position | 168 | ||||
| Protein_position | 56 | ||||
| Exon_number | 3/6 | ||||
| Codon_change | ggA/ggG | ||||
| Amino_acid_change | G | ||||
| Y71H2B.11.3 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | Y71H2B.11.3:c.168A>G | ||||
| HGVSp | CE34427:p.Gly56= | ||||
| cDNA_position | 395 | ||||
| CDS_position | 168 | ||||
| Protein_position | 56 | ||||
| Exon_number | 3/6 | ||||
| Codon_change | ggA/ggG | ||||
| Amino_acid_change | G | ||||
| Y71H2B.11.2 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | Y71H2B.11.2:c.168A>G | ||||
| HGVSp | CE34427:p.Gly56= | ||||
| cDNA_position | 471 | ||||
| CDS_position | 168 | ||||
| Protein_position | 56 | ||||
| Exon_number | 4/7 | ||||
| Codon_change | ggA/ggG | ||||
| Amino_acid_change | G | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00040707 | |||||
| WBPaper00037807 | |||||
| Remark | [20081124 db] this Variation was previously named hw41085 | ||||
| Method | WGS_Hawaiian_Waterston |
