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WormBase Tree Display for Variation: WBVar00049153

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Name Class

WBVar00049153NamePublic_nameWBVar00049153
Other_namehaw40953
haw141831
cewivar00103699
Y54F10AM.4.1:c.52-20T>A
Y54F10AM.16a.1:c.52-20T>A
Y54F10AM.16b.1:c.52-20T>A
HGVSgCHROMOSOME_III:g.2530694T>A
Sequence_detailsSMapS_parentSequenceY54F10AM
Flanking_sequencesaagttttttggaaaaaaaaattattaaaaaatctgaaatttcagacaaga
Mapping_targetY54F10AM
Type_of_mutationSubstitutionTA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (22)
LaboratoryRW
AX
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01328119
WBVar00561696
StatusLive
AffectsGeneWBGene00306126
WBGene00000464
TranscriptY54F10AM.16b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54F10AM.16b.1:c.52-20T>A
Intron_number1/12
Y54F10AM.4.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54F10AM.4.1:c.52-20T>A
Intron_number1/11
Y54F10AM.16a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY54F10AM.16a.1:c.52-20T>A
Intron_number1/12
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw40953
MethodWGS_Hawaiian_Waterston