WormBase Tree Display for Variation: WBVar00047645
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| WBVar00047645 | Name | Public_name | WBVar00047645 | ||
|---|---|---|---|---|---|
| Other_name | haw90627 | ||||
| cewivar00257019 | |||||
| CE45116:p.Leu862= | |||||
| Y20C6A.1a.1:c.2439G>C | |||||
| CE37058:p.Leu813= | |||||
| Y20C6A.1b.1:c.2586G>C | |||||
| HGVSg | CHROMOSOME_V:g.17372169C>G | ||||
| Sequence_details | SMap | S_parent | Sequence | Y20C6A | |
| Flanking_sequences | tcagctcatttttatccaaataaga | aggatccttcttatgatcggtagat | |||
| Mapping_target | Y20C6A | ||||
| Type_of_mutation | Substitution | C | G | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | ||
| WGS_Hawaiian_Waterston | |||||
| WBStrain00006629 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00006643 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00006645 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022850 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023072 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023191 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023286 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00024204 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00027647 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00012491 | |||
| Transcript | Y20C6A.1a.1 | VEP_consequence | synonymous_variant | ||
| VEP_impact | LOW | ||||
| HGVSc | Y20C6A.1a.1:c.2439G>C | ||||
| HGVSp | CE37058:p.Leu813= | ||||
| cDNA_position | 2481 | ||||
| CDS_position | 2439 | ||||
| Protein_position | 813 | ||||
| Exon_number | 9/11 | ||||
| Codon_change | ctG/ctC | ||||
| Amino_acid_change | L | ||||
| Y20C6A.1b.1 | VEP_consequence | synonymous_variant | |||
| VEP_impact | LOW | ||||
| HGVSc | Y20C6A.1b.1:c.2586G>C | ||||
| HGVSp | CE45116:p.Leu862= | ||||
| cDNA_position | 2586 | ||||
| CDS_position | 2586 | ||||
| Protein_position | 862 | ||||
| Exon_number | 8/9 | ||||
| Codon_change | ctG/ctC | ||||
| Amino_acid_change | L | ||||
| Remark | [20081124 db] this Variation was previously named hw90627 | ||||
| Method | WGS_Hawaiian_Waterston |
