WormBase Tree Display for Variation: WBVar00047393

WBVar00047393 Name: Public_name: WBVar00047393
    Other_name: haw40601
      cewivar00148929
      H14E04.2d.1:c.204T>C
      H14E04.2a.1:c.570T>C
      CE29974:p.Cys197=
      H14E04.2c.1:c.591T>C
      H14E04.2b.1:c.579T>C
      CE20967:p.Cys193=
      CE20966:p.Cys190=
      CE32458:p.Cys68=
    HGVSg: CHROMOSOME_III:g.2379683T>C
  Sequence_details: SMap: S_parent: Sequence: H14E04
    Flanking_sequences: cttttcccaatggattgccaacttg gcaatatccgaatgcttgagatgct
    Mapping_target: H14E04
    Type_of_mutation: Substitution: T C
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain: WBStrain00004600 From_analysis: Million_mutation_project_reanalysis
      WBStrain00004602 From_analysis: Million_mutation_project_reanalysis
          WGS_Hawaiian_Waterston
      WBStrain00006629 From_analysis: Million_mutation_project_reanalysis
      WBStrain00006631 From_analysis: Million_mutation_project_reanalysis
      WBStrain00006637 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023018 From_analysis: Million_mutation_project_reanalysis
      WBStrain00023072 From_analysis: Million_mutation_project_reanalysis
      WBStrain00024204 From_analysis: Million_mutation_project_reanalysis
    Laboratory: RW
    Person: WBPerson1562
    Analysis: WGS_Hawaiian_Waterston
      Million_mutation_project_reanalysis
    Status: Live
  Affects: Gene: WBGene00019199
    Transcript: H14E04.2a.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: H14E04.2a.1:c.570T>C
        HGVSp: CE20966:p.Cys190=
        cDNA_position: 575
        CDS_position: 570
        Protein_position: 190
        Exon_number: 6/12
        Codon_change: tgT/tgC
        Amino_acid_change: C
      H14E04.2c.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: H14E04.2c.1:c.591T>C
        HGVSp: CE29974:p.Cys197=
        cDNA_position: 596
        CDS_position: 591
        Protein_position: 197
        Exon_number: 7/13
        Codon_change: tgT/tgC
        Amino_acid_change: C
      H14E04.2b.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: H14E04.2b.1:c.579T>C
        HGVSp: CE20967:p.Cys193=
        cDNA_position: 586
        CDS_position: 579
        Protein_position: 193
        Exon_number: 6/12
        Codon_change: tgT/tgC
        Amino_acid_change: C
      H14E04.2d.1 VEP_consequence: synonymous_variant
        VEP_impact: LOW
        HGVSc: H14E04.2d.1:c.204T>C
        HGVSp: CE32458:p.Cys68=
        cDNA_position: 220
        CDS_position: 204
        Protein_position: 68
        Exon_number: 3/9
        Codon_change: tgT/tgC
        Amino_acid_change: C
  Remark: [20081124 db] this Variation was previously named hw40601
  Method: WGS_Hawaiian_Waterston