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WormBase Tree Display for Variation: WBVar00046128

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Name Class

WBVar00046128NamePublic_nameWBVar00046128
Other_namesnp_C39B5[3]
haw40348
haw141466
cewivar00148785
C39B5.7.1:c.54-160T>A
HGVSgCHROMOSOME_III:g.2220414T>A
Sequence_detailsSMapS_parentSequenceC39B5
Flanking_sequencesctccaaaatattttaaaaagttcaattgaattttctgccaaatattgttg
Mapping_targetC39B5
Type_of_mutationSubstitutionTA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004600From_analysisMillion_mutation_project_reanalysis
WBStrain00004602From_analysisSNP_Wicks
WGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
LaboratoryRW
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
SNP_Wicks
HistoryAcquires_mergeWBVar00561331
WBVar00243566
StatusLive
AffectsGeneWBGene00016525
TranscriptC39B5.7.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScC39B5.7.1:c.54-160T>A
Intron_number2/4
ReferenceWBPaper00038208
WBPaper00004703
Remark[20081124 db] this Variation was previously named hw40348
MethodWGS_Hawaiian_Waterston