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WormBase Tree Display for Variation: WBVar00045373

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Name Class

WBVar00045373NamePublic_nameWBVar00045373
Other_namehaw40197
haw141371
cewivar00148717
Y48G9A.4a.1:c.76-158T>A
Y48G9A.4b.1:c.331-158T>A
HGVSgCHROMOSOME_III:g.2136254T>A
Sequence_detailsSMapS_parentSequenceY48G9A
Flanking_sequencestcaaattttcagctagaaacccgttaaaaaaaagttgttgtggtaaaaaa
Mapping_targetY48G9A
Type_of_mutationSubstitutionTA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004600From_analysisMillion_mutation_project_reanalysis
WBStrain00004602From_analysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
WBStrain00006631From_analysisMillion_mutation_project_reanalysis
WBStrain00006637From_analysisMillion_mutation_project_reanalysis
WBStrain00022850From_analysisWGS_De_Bono
Million_mutation_project_reanalysis
WBStrain00022930From_analysisMillion_mutation_project_reanalysis
WBStrain00023018From_analysisMillion_mutation_project_reanalysis
WBStrain00023665From_analysisMillion_mutation_project_reanalysis
WBStrain00024204From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar01326964
WBVar00561236
StatusLive
AffectsGeneWBGene00021698
TranscriptY48G9A.4b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY48G9A.4b.1:c.331-158T>A
Intron_number4/15
Y48G9A.4a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY48G9A.4a.1:c.76-158T>A
Intron_number1/12
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw40197
MethodWGS_Hawaiian_Waterston