WormBase Tree Display for Variation: WBVar00044145
expand all nodes | collapse all nodes | view schema
WBVar00044145 | Name | Public_name | WBVar00044145 | ||
---|---|---|---|---|---|
Other_name | haw89927 | ||||
haw174888 | |||||
cewivar00255017 | |||||
Y102A5C.20:n.1299A>T | |||||
HGVSg | CHROMOSOME_V:g.16970337A>T | ||||
Sequence_details | SMap | S_parent | Sequence | Y102A5C | |
Flanking_sequences | ctactccacatttaacaaagaaaaa | tctcgtaaatctacacattttctgt | |||
Mapping_target | Y102A5C | ||||
Type_of_mutation | Substitution | A | T | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain (16) | |||||
Laboratory | RW | ||||
AX | |||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_De_Bono | |||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar01275845 | |||
WBVar00594753 | |||||
Status | Live | ||||
Affects | Gene | WBGene00013624 | |||
Pseudogene | Y102A5C.20 | VEP_consequence | non_coding_transcript_exon_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y102A5C.20:n.1299A>T | ||||
cDNA_position | 1299 | ||||
Exon_number | 1/1 | ||||
Reference | WBPaper00038208 | ||||
WBPaper00037807 | |||||
Remark | [20081124 db] this Variation was previously named hw89927 | ||||
Method | WGS_Hawaiian_Waterston |