WormBase Tree Display for Variation: WBVar00044048
expand all nodes | collapse all nodes | view schema
| WBVar00044048 | Name | Public_name | WBVar00044048 | ||
|---|---|---|---|---|---|
| Other_name | haw39932 | ||||
| cewivar00148552 | |||||
| R155.3.1:c.2221+227A>G | |||||
| HGVSg | CHROMOSOME_III:g.1973020T>C | ||||
| Sequence_details | SMap | S_parent | Sequence | R155 | |
| Flanking_sequences | attcctagttactaatacagtatcc | tacagtatccctacagtatccctacagtatccctacaggatcccgacagttttcctacagtactccaacaattgttctaaatcattcttttactacagtacctctagtacccctacagtactcctacagttttcctatagt | |||
| Mapping_target | R155 | ||||
| Type_of_mutation | Substitution | T | C | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain | WBStrain00004600 | From_analysis | Million_mutation_project_reanalysis | ||
| WBStrain00004602 | From_analysis | Million_mutation_project_reanalysis | |||
| WGS_Hawaiian_Waterston | |||||
| WBStrain00006640 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00008273 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00022930 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023138 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00023192 | From_analysis | Million_mutation_project_reanalysis | |||
| WBStrain00031113 | From_analysis | Million_mutation_project_reanalysis | |||
| Laboratory | RW | ||||
| Person | WBPerson1562 | ||||
| Analysis | WGS_Hawaiian_Waterston | ||||
| Million_mutation_project_reanalysis | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00020117 | |||
| Transcript | R155.3.1 | VEP_consequence | intron_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | R155.3.1:c.2221+227A>G | ||||
| Intron_number | 5/10 | ||||
| Remark | [20081124 db] this Variation was previously named hw39932 | ||||
| Method | WGS_Hawaiian_Waterston |
