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WormBase Tree Display for Variation: WBVar00043268

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Name Class

WBVar00043268EvidencePaper_evidenceWBPaper00038208
NamePublic_nameWBVar00043268
Other_namehaw39776
haw141077
cewivar00194592
Y39A3CR.1d.1:c.345-107T>C
Y39A3CR.1c.1:c.321-107T>C
Y39A3CR.1b.1:c.630-107T>C
Y39A3CR.1a.1:c.654-107T>C
HGVSgCHROMOSOME_III:g.1880529T>C
Sequence_detailsSMapS_parentSequenceY39A3CR
Flanking_sequencesgatttccttgcaaaattctcaattttacaatttctttcaaaaaaaatcaa
Mapping_targetY39A3CR
Type_of_mutationSubstitutionTC
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
LaboratoryRW
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00560942
StatusLive
AffectsGeneWBGene00004886
TranscriptY39A3CR.1d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY39A3CR.1d.1:c.345-107T>C
Intron_number3/3
Y39A3CR.1a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY39A3CR.1a.1:c.654-107T>C
Intron_number5/6
Y39A3CR.1b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY39A3CR.1b.1:c.630-107T>C
Intron_number5/6
Y39A3CR.1c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY39A3CR.1c.1:c.321-107T>C
Intron_number3/3
ReferenceWBPaper00038208
Remark[20081124 db] this Variation was previously named hw39776
MethodWGS_Hawaiian_Waterston