WormBase Tree Display for Variation: WBVar00043268
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WBVar00043268 | Evidence | Paper_evidence | WBPaper00038208 | ||
---|---|---|---|---|---|
Name | Public_name | WBVar00043268 | |||
Other_name | haw39776 | ||||
haw141077 | |||||
cewivar00194592 | |||||
Y39A3CR.1d.1:c.345-107T>C | |||||
Y39A3CR.1c.1:c.321-107T>C | |||||
Y39A3CR.1b.1:c.630-107T>C | |||||
Y39A3CR.1a.1:c.654-107T>C | |||||
HGVSg | CHROMOSOME_III:g.1880529T>C | ||||
Sequence_details | SMap | S_parent | Sequence | Y39A3CR | |
Flanking_sequences | gatttccttgcaaaattctcaattt | tacaatttctttcaaaaaaaatcaa | |||
Mapping_target | Y39A3CR | ||||
Type_of_mutation | Substitution | T | C | ||
SeqStatus | Sequenced | ||||
Variation_type | SNP | ||||
Predicted_SNP | |||||
Natural_variant | |||||
Origin | Species | Caenorhabditis elegans | |||
Strain | WBStrain00004602 | From_analysis | WGS_Hawaiian_Waterston | ||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
Laboratory | RW | ||||
Person | WBPerson1562 | ||||
WBPerson4037 | |||||
Analysis | WGS_Hawaiian_Waterston | ||||
WGS_Yanai | |||||
Million_mutation_project_reanalysis | |||||
History | Acquires_merge | WBVar00560942 | |||
Status | Live | ||||
Affects | Gene | WBGene00004886 | |||
Transcript | Y39A3CR.1d.1 | VEP_consequence | intron_variant | ||
VEP_impact | MODIFIER | ||||
HGVSc | Y39A3CR.1d.1:c.345-107T>C | ||||
Intron_number | 3/3 | ||||
Y39A3CR.1a.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y39A3CR.1a.1:c.654-107T>C | ||||
Intron_number | 5/6 | ||||
Y39A3CR.1b.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y39A3CR.1b.1:c.630-107T>C | ||||
Intron_number | 5/6 | ||||
Y39A3CR.1c.1 | VEP_consequence | intron_variant | |||
VEP_impact | MODIFIER | ||||
HGVSc | Y39A3CR.1c.1:c.321-107T>C | ||||
Intron_number | 3/3 | ||||
Reference | WBPaper00038208 | ||||
Remark | [20081124 db] this Variation was previously named hw39776 | ||||
Method | WGS_Hawaiian_Waterston |