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WormBase Tree Display for Variation: WBVar00041730

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Name Class

WBVar00041730EvidencePaper_evidenceWBPaper00038208
NamePublic_nameWBVar00041730
Other_namehaw89444
haw174529
cewivar00253927
T25E12.4e.1:c.2096-98A>T
T25E12.4a.1:c.2102-98A>T
T25E12.4b.1:c.496+35A>T
T25E12.4f.1:c.2177-98A>T
T25E12.4d.1:c.1436-98A>T
T25E12.4c.1:c.1508-98A>T
HGVSgCHROMOSOME_V:g.16785287A>T
Sequence_detailsSMapS_parentSequenceF14D1
Flanking_sequencesatttccatttttttaatgttcaaacagtggcagatcgattagttttcaga
Mapping_targetF14D1
Type_of_mutationSubstitutionAT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
Strain (12)
LaboratoryRW
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00594394
StatusLive
AffectsGeneWBGene00012019
TranscriptT25E12.4f.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT25E12.4f.1:c.2177-98A>T
Intron_number15/18
T25E12.4d.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT25E12.4d.1:c.1436-98A>T
Intron_number10/13
T25E12.4c.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT25E12.4c.1:c.1508-98A>T
Intron_number10/13
T25E12.4b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT25E12.4b.1:c.496+35A>T
Intron_number2/5
T25E12.4a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT25E12.4a.1:c.2102-98A>T
Intron_number14/18
T25E12.4e.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScT25E12.4e.1:c.2096-98A>T
Intron_number14/17
ReferenceWBPaper00038208
Remark[20081124 db] this Variation was previously named hw89444
MethodWGS_Hawaiian_Waterston