WormBase Tree Display for Variation: WBVar00041651
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| WBVar00041651 | Name | Public_name | WBVar00041651 | ||
|---|---|---|---|---|---|
| Other_name | pas19927 | ||||
| uCE2-854 | |||||
| haw18631 | |||||
| haw125562 | |||||
| cewivar00081805 | |||||
| F36H5.13.1:c.-438G>A | |||||
| F36H5.8.1:c.*162G>A | |||||
| HGVSg | CHROMOSOME_II:g.1749979C>T | ||||
| Sequence_details | SMap | S_parent | Sequence | F36H5 | |
| Flanking_sequences | ggcgtgctttataggtttttctaaaataaactgctagtgatgccgaatttcgtaactacgccagtgttcaacattggacaaaaatccgtcccgctcatagaatttggaatgtctctttcctctgccggatgataatcgatacctttcataacaacatccttattgtagctttctccttctcgagattttatgagagcaatcccgtgaagactctgattcgatccggctatccaatgtttaagaaacaaattgagttgagcatccggtaagctattagtcatattatctaaaaatgacaca | tcgaagccaacaaatcgttcagattaatacgtgtcacattttggttgaaatatgtgactctattgggattttgaacaagtatctgatgaaagccaggtgttaacgtatttttacagtcgagaaatactattttgtgcacaattggcagtgtgccgaacaatttaatatttggtccacaattctctgatgtgcaatccagctaaacttttgtgaaagcctttcaagtcatacttgtgtttcttcttaatgcttgaaagagttaactcgtcaatacgcttagcagttgcaagttccatacaa | |||
| Mapping_target | F36H5 | ||||
| Type_of_mutation | Substitution | C | T | ||
| SeqStatus | Sequenced | ||||
| Variation_type | SNP | ||||
| Predicted_SNP | |||||
| Natural_variant | |||||
| Origin | Species | Caenorhabditis elegans | |||
| Strain (15) | |||||
| Laboratory | AX | ||||
| RW | |||||
| Person | WBPerson6900 | ||||
| WBPerson4037 | |||||
| WBPerson1562 | |||||
| Analysis | WGS_Pasadena_Quinlan | ||||
| WGS_De_Bono | |||||
| WGS_Yanai | |||||
| Million_mutation_project_reanalysis | |||||
| SNP_Swan | |||||
| WGS_Hawaiian_Waterston | |||||
| History | Acquires_merge | WBVar01296193 | |||
| WBVar00545427 | |||||
| WBVar00268019 | |||||
| WBVar01361392 | |||||
| WBVar00165381 | |||||
| Status | Live | ||||
| Affects | Gene | WBGene00018106 | |||
| WBGene00206519 | |||||
| Transcript | F36H5.13.1 | VEP_consequence | 5_prime_UTR_variant | ||
| VEP_impact | MODIFIER | ||||
| HGVSc | F36H5.13.1:c.-438G>A | ||||
| cDNA_position | 535 | ||||
| Exon_number | 1/5 | ||||
| F36H5.8.1 | VEP_consequence | 3_prime_UTR_variant | |||
| VEP_impact | MODIFIER | ||||
| HGVSc | F36H5.8.1:c.*162G>A | ||||
| cDNA_position | 657 | ||||
| Exon_number | 4/4 | ||||
| Reference | WBPaper00038208 | ||||
| WBPaper00037807 | |||||
| WBPaper00005369 | |||||
| Method | WGS_Pasadena_Quinlan |
