WormBase Tree Display for Variation: WBVar00041410

WBVar00041410 Name: Public_name: WBVar00041410
    Other_name: haw89380
      haw174478
      LSJ2_216
      cewivar00047145
      T25E12.4e.1:c.789+213A>T
      T25E12.4a.1:c.789+213A>T
      T25E12.4f.1:c.789+213A>T
      T25E12.4d.1:c.123+213A>T
    HGVSg: CHROMOSOME_V:g.16758383A>T
  Sequence_details: SMap: S_parent: Sequence: F14D1
    Flanking_sequences: aaaataaattgaatacaattaaatt aaaaaaaaaatttcaaaaaatttat
    Mapping_target: F14D1
    Type_of_mutation: Substitution: A T
    SeqStatus: Sequenced
  Variation_type: SNP
    Predicted_SNP
    Natural_variant
  Origin: Species: Caenorhabditis elegans
    Strain (26)
    Laboratory: RW
      CX
    Person: WBPerson1562
      WBPerson4037
    Analysis: WGS_Hawaiian_Waterston
      WGS_McGrath
      WGS_Yanai
      Million_mutation_project_reanalysis
    History: Acquires_merge: WBVar00594343
        WBVar00601497
    Status: Live
  Affects: Gene: WBGene00012019
    Transcript: T25E12.4f.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T25E12.4f.1:c.789+213A>T
        Intron_number: 5/18
      T25E12.4d.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T25E12.4d.1:c.123+213A>T
        Intron_number: 1/13
      T25E12.4a.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T25E12.4a.1:c.789+213A>T
        Intron_number: 5/18
      T25E12.4e.1 VEP_consequence: intron_variant
        VEP_impact: MODIFIER
        HGVSc: T25E12.4e.1:c.789+213A>T
        Intron_number: 5/17
  Reference: WBPaper00038208
    WBPaper00040097
  Remark: [20081124 db] this Variation was previously named hw89380
  Method: WGS_Hawaiian_Waterston