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WormBase Tree Display for Variation: WBVar00039768

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Name Class

WBVar00039768NamePublic_nameWBVar00039768
Other_namehaw39076
haw140588
M01G5.5.1:c.1996-488T>A
HGVSgCHROMOSOME_III:g.1520861A>T
Sequence_detailsSMapS_parentSequenceM01G5
Flanking_sequencestaacatttttagctatttttcgagcaaacttcagaattttccactaaaaa
Mapping_targetM01G5
Type_of_mutationSubstitutionAT
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_Hawaiian_Waterston
WGS_Yanai
WBStrain00006642From_analysisWGS_De_Bono
WBStrain00022850From_analysisWGS_De_Bono
LaboratoryRW
AX
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
HistoryAcquires_mergeWBVar00560453
WBVar01324812
WBVar01257342
StatusLive
AffectsGeneWBGene00004905
TranscriptM01G5.5.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScM01G5.5.1:c.1996-488T>A
Intron_number11/12
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw39076
MethodWGS_Hawaiian_Waterston