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WormBase Tree Display for Variation: WBVar00039028

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Name Class

WBVar00039028NamePublic_nameWBVar00039028
Other_namehaw38928
haw140496
cewivar00193903
Y82E9BR.17b.4:c.236+642C>T
Y82E9BR.17b.6:c.236+642C>T
Y82E9BR.17b.5:c.236+642C>T
Y82E9BR.17b.3:c.236+642C>T
Y82E9BR.17b.1:c.236+642C>T
Y82E9BR.17a.1:c.1385+642C>T
Y82E9BR.17b.2:c.236+642C>T
HGVSgCHROMOSOME_III:g.1449333G>A
Sequence_detailsSMapS_parentSequenceY82E9BR
Flanking_sequencesccgtatcgcacaggtagatattttcaagtttaatatcattttttgttctc
Mapping_targetY82E9BR
Type_of_mutationSubstitutionGA
SeqStatusSequenced
Variation_typeSNP
Predicted_SNP
Natural_variant
OriginSpeciesCaenorhabditis elegans
StrainWBStrain00004602From_analysisWGS_Hawaiian_Waterston
WGS_Yanai
Million_mutation_project_reanalysis
WBStrain00006622From_analysisMillion_mutation_project_reanalysis
WBStrain00006642From_analysisWGS_De_Bono
WBStrain00006643From_analysisMillion_mutation_project_reanalysis
WBStrain00006645From_analysisMillion_mutation_project_reanalysis
WBStrain00022852From_analysisMillion_mutation_project_reanalysis
WBStrain00022856From_analysisMillion_mutation_project_reanalysis
WBStrain00022878From_analysisMillion_mutation_project_reanalysis
WBStrain00027647From_analysisMillion_mutation_project_reanalysis
LaboratoryRW
AX
PersonWBPerson1562
WBPerson4037
AnalysisWGS_Hawaiian_Waterston
WGS_De_Bono
WGS_Yanai
Million_mutation_project_reanalysis
HistoryAcquires_mergeWBVar00560361
WBVar01257069
StatusLive
AffectsGeneWBGene00022349
TranscriptY82E9BR.17b.6VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY82E9BR.17b.6:c.236+642C>T
Intron_number4/5
Y82E9BR.17b.5VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY82E9BR.17b.5:c.236+642C>T
Intron_number5/6
Y82E9BR.17b.3VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY82E9BR.17b.3:c.236+642C>T
Intron_number7/8
Y82E9BR.17a.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY82E9BR.17a.1:c.1385+642C>T
Intron_number15/16
Y82E9BR.17b.4VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY82E9BR.17b.4:c.236+642C>T
Intron_number7/8
Y82E9BR.17b.2VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY82E9BR.17b.2:c.236+642C>T
Intron_number13/14
Y82E9BR.17b.1VEP_consequenceintron_variant
VEP_impactMODIFIER
HGVScY82E9BR.17b.1:c.236+642C>T
Intron_number14/15
ReferenceWBPaper00038208
WBPaper00037807
Remark[20081124 db] this Variation was previously named hw38928
MethodWGS_Hawaiian_Waterston